Job Description P10905 Confidence 100.00% Date Wed Jan 25 15:20:37 GMT 2012 Rank 2 Aligned Residues 233 % Identity 30% Template c2r6gF_ PDB info PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter Resolution 2.80 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.																																	.
Query SS confidence																			.	.	.	.																																	.
Query Sequence		S	Q	F	V	G	L	D	N	F	V	T	L	F	H	D	S	Y	.	.	.	.	Y	L	D	S	F	W	T	T	I	K	F	S	T	F	V	T	V	S	G	L	L	V	S	L	F	F	A	A	L	V	E	Y	.	I	V	R	G	S	R	F	Y	Q	T	L	M	L	L	P	Y	A	V	A	P	A	V	A	A	V	L
Query Conservation																			.	.	.	.																																	.
Alig confidence																			.	.	.	.																																	.
Template Conservation
Template Sequence		T	V	T	T	G	W	K	N	F	T	R	V	F	T	D	E	G	I	Q	K	P	F	L	A	I	F	V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S	I	L	I
Template Known Secondary structure				B		T	T	T	T	T	S	G	G	G	T		T	T	T	S	T	T																															T		S	S	S	T	T								T	T					S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		W	I	F	L	F	N	P	G	R	G	L	I	T	H	F	L	A	E	F	.	G	Y	D	W	N	H	A	Q	N	S	G	Q	A	M	F	L	V	V	F	A	S	V	W	K	Q	I	S	Y	N	F	L	F	F	Y	A	A	L	Q	S	I	P	R	S	L	I	E	A	A	A	I	D	G	A	G	P	I	R	R	F	F
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		F	K	G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S	A	L	F	G	V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F
Template Known Secondary structure						T		S	S	S	S									T	S	S					T	T	T	S																												G	G	G	S		T									T				S
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240								.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.																						.	.	.
Query SS confidence																																						.	.	.	.	.	.	.																						.	.	.
Query Sequence		K	I	A	L	P	L	I	A	P	V	S	F	F	L	L	V	V	N	L	V	Y	A	F	F	D	T	F	P	V	I	D	A	A	T	S	G	.	.	.	.	.	.	.	G	P	V	Q	A	T	T	T	L	I	Y	K	I	Y	R	E	G	F	T	G	L	.	.	.	D	L	A	S	S	A	A	Q	S	V	V	L	M
Query Conservation																																						.	.	.	.	.	.	.																						.	.	.
Alig confidence																																						.	.	.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		K	I	T	L	P	L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F	N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F
Template Known Secondary structure			T	T	G	G	G	T																	T										S	S		S	B		S	S		S	S			B	S	S												T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		275	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	V	I	V	L	T	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	V	G	A	L	A	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		496	.	.	.	500	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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