Job Description P10905 Confidence 100.00% Date Wed Jan 25 15:20:37 GMT 2012 Rank 6 Aligned Residues 249 % Identity 19% Template c2onkC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease PDBTitle: abc transporter modbc in complex with its binding protein2 moda Resolution 3.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		R	W	L	P	Y	L	L	V	A	P	Q	L	I	I	T	V	I	F	F	I	W	P	A	G	E	A	L	W	Y	S	L	Q	S	V	D	P	F	G	F	S	S	Q	F	V	G	L	D	N	F	V	T	L	F	H	D	S	Y	Y	L	D	S	F	W	T	T	I	K	F	S	T	F	V	T	V	S	G	L	L	V	S
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	L	F	S	A	L	L	A	L	L	S	S	I	I	L	L	F	V	L	L	P	V	A	A	T	V	T	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	L	F	N	F	D	E	F	L	K	A	A	S	D	P	A	V	W	K	V	V	L	T	T	Y	Y	A	A	L	I	S	T	L	I	A	V	I	F	G
Template Known Secondary structure																														T	T	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.													.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	F	F	A	A	L	V	E	Y	.	I	V	R	G	S	R	F	Y	Q	T	L	M	L	L	P	Y	A	V	A	P	A	V	A	A	V	L	W	I	F	L	F	N	P	G	R	G	L	I	T	H	F	L	A	E	F	G	Y	D	W	N	H	A	Q	N	S	G	Q	A	M	F	L	V	V	F	A	S	V	W	K	Q
Query Conservation											.
Alig confidence											.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	L	A	Y	I	L	A	R	K	S	F	P	G	K	S	V	V	E	G	I	V	D	L	P	V	V	I	P	H	T	V	A	G	I	A	L	L	V	V	F	G	S	S	G	.	.	.	.	.	.	.	.	.	.	L	I	G	S	F	S	P	L	K	F	V	D	A	L	P	G	I	V	V	A	M	L	F	V	S
Template Known Secondary structure										S				S	S														S														S	T	T	S	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T		S	S			T	T	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.											.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	Y	N	F	L	F	F	Y	A	A	L	Q	S	I	P	R	S	L	I	E	A	A	A	I	D	G	A	G	P	I	R	R	F	F	K	I	A	L	P	L	I	A	P	V	S	F	F	L	L	V	V	N	L	V	Y	A	F	F	D	T	F	P	V	I	D	A	A	T	S	G	G	P	V	Q	A	T	T	T	L
Query Conservation
Alig confidence																																																																									.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.
Template Sequence		V	P	I	Y	I	N	Q	A	K	E	G	F	A	S	V	D	V	R	L	E	H	V	A	R	T	L	G	S	S	P	L	R	V	F	F	T	V	S	L	P	L	S	V	R	H	I	V	A	G	A	I	M	S	W	A	R	G	I	S	E	F	G	A	V	V	V	I	A	Y	Y	P	.	.	.	.	.	.	M	I	A
Template Known Secondary structure																S											T	T										T																													T	T			S	S	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	K	I	Y	R	E	G	F	T	G	L	D	L	A	S	S	A	A	Q	S	V	V	L	M	F	L	V	I	V	L	T	V	V	Q	F	R	Y	V
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		P	T	L	I	Y	E	R	.	Y	L	S	E	G	L	S	A	A	M	P	V	A	A	I	L	I	L	L	S	L	A	V	F	V	A	L	R	I	I	V
Template Known Secondary structure									.						G	G	G	T																					T	T
Template Predicted Secondary structure									.
Template SS confidence
		214	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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