Job Description P39265 Confidence 45.30% Date Thu Jan 5 11:58:38 GMT 2012 Rank 181 Aligned Residues 141 % Identity 13% Template c3rggD_ PDB info PDB header:lyase Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase, pure protein; PDBTitle: crystal structure of treponema denticola pure bound to air Resolution 1.82 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		A	A	E	Y	A	V	V	L	K	T	L	S	N	P	F	W	V	D	M	K	K	G	I	E	D	E	A	K	T	L	G	V	S	V	D	I	F	A	S	P	S	E	G	D	F	Q	S	Q	L	Q	L	F	E	D	L	S	N	K	N	.	Y	K	G	I	A	F	A	P	L	S	S	V	N	L	V	M	P	V	A	R
Query Conservation																																																													.
Alig confidence															.	.	.																																												.
Template Conservation															.	.	.
Template Sequence		R	P	L	V	I	I	L	M	G	S	S	S	D	.	.	.	M	G	H	A	E	K	I	A	S	E	L	K	T	F	G	I	E	Y	A	I	R	I	G	S	A	H	K	T	A	E	H	V	V	S	M	L	K	E	Y	E	A	L	D	R	P	K	L	Y	I	T	I	A	G	R	S	N	A	L	S	G	F	V	D	G
Template Known Secondary structure										S	S	G	G	G	.	.	.														T	T										T	T	T														T	S	S	S										S	S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		A	W	K	K	G	I	Y	L	V	N	L	D	E	K	I	D	M	D	N	L	K	K	.	.	.	.	.	A	G	G	N	V	E	A	F	V	T	T	D	N	V	A	V	G	A	K	G	A	S	F	I	I	D	K	L	G	A	E	G	G	E	V	A	I	I	E	G	K	A	G	N	A	S	G	E	A	R	R	N	G
Query Conservation																								.	.	.	.	.
Alig confidence					.	.																		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	K	.	.	G	A	T	I	A	C	P	P	P	S	D	S	F	A	G	A	D	I	Y	S	S	L	R	M	P	S	G	I	S	P	A	L	V	L	E	P	K	N	A	A	L	L	A	A	R	I	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	D	K	E	I	A	D	S	V	K	S
Template Known Secondary structure			S	S	.	.	S											G	G	G	G	G	G	G								T	T							S	S													T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure					.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																130	.	.	.	.	.	.	.	.	.	140	.
		178	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	E	A	F	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	M	E	S	N	A	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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