Return to main results Retrieve Phyre Job Id

Job DescriptionP39265
Confidence22.47%DateThu Jan 5 11:58:38 GMT 2012
Rank230Aligned Residues89
% Identity9%Templatec3pueA_
PDB info PDB header:lyaseChain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of the complex of dhydrodipicolinate synthase from2 acinetobacter baumannii with lysine at 2.6a resolution
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30......... 40.........50.........60.........70.........80.........90 ........
Predicted Secondary structure 




....











.....





Query SS confidence 











. . . .


















































. . . . .







Query Sequence  AVVLKTLSNPFW. . . . VDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAP. . . . . LSSVNLVM
Query Conservation 


       
 ....     

   
   
    
       
       
  
     
 

   .....        
Alig confidence 











....


















































.....







Template Conservation 

   
 


   

  

  
             

 

        
  
  
   
 
 
 
 

     
   
  
Template Sequence  SIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQ
Template Known Secondary structure  SSGGGTGGGS

SSS



SSTT
S


SS


Template Predicted Secondary structure 





























Template SS confidence 















































































   38.40.........50.........60.........70.........80.........90.........100.........110.......
 
   99100..... ....110......
Predicted Secondary structure  .





Query SS confidence 






.










Query Sequence  PVARAWK. KGIYLVNLDEK
Query Conservation         .  
        
Alig confidence 






.










Template Conservation      

     

  

 
Template Sequence  HYKAIAEAVELPLILYNVP
Template Known Secondary structure 

S

Template Predicted Secondary structure 





Template SS confidence 


















   118.120.........130......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions