Job Description P39265 Confidence 69.04% Date Thu Jan 5 11:58:38 GMT 2012 Rank 155 Aligned Residues 248 % Identity 13% Template c3opyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:6-phosphofructo-1-kinase beta-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state Resolution 3.05 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	T	S	A	F	A	A	A	E	Y	A	V	V	L	K	T	L	S	N	P	F	W	V	D	M	K	K	G	I	E	D	E	A	K	T	L	G	V	S	V	D	I	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	N	E	R	V	R	K	T	I	G	V	M	T	S	G	G	D	S	P	G	M	N	P	F	V	R	A	V	V	R	A	G	I	Y	K	G	C	K	V	F	C	I	H	E	G	Y	E	G	L	V	R	G	G	E	K	Y	I	K	E	T	Q	W	H	D	V	R	G	W	L	V	E	G	G	T	N	I	G	T	A
Template Known Secondary structure																	S	S			T	T															T	T							T	T									S	T	T	T						G	G	G	G	T	T	T	T	T			S		S	S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
			62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.														.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	S	P	S	E	G	D	F	Q	S	Q	L	Q	L	F	E	D	L	S	N	K	N	Y	K	G	I	A	F	A	P	L	S	S	V	N	L	V	M	P	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	W	K	K	G	I	Y	L	V	N	L	D	E	K	I	D	M	D	N	L	K	K	A	G	G
Query Conservation		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		R	C	K	E	F	R	E	R	S	G	R	L	K	A	C	K	N	M	I	D	M	G	I	D	A	L	I	V	C	G	G	D	G	S	L	T	G	A	D	R	F	R	S	E	W	P	S	L	I	E	E	Q	Q	Q	F	N	T	H	Q	N	L	N	I	C	G	A	V	G	S	I	D	N	D	M	S	.	.	.	.	.
Template Known Secondary structure				S	G	G	G	S															T																						T														T		S										S	S				S	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.
Predicted Secondary structure																																																																											.	.	.	.
Query SS confidence																																																																											.	.	.	.
Query Sequence		N	V	E	A	F	V	T	T	D	N	V	A	V	G	A	K	G	A	S	F	I	I	D	K	L	G	A	E	G	G	E	V	A	I	I	E	G	K	A	G	N	A	S	G	E	A	R	R	N	G	A	T	E	A	F	K	K	A	S	Q	I	K	L	V	A	S	Q	P	A	D	W	D	R	.	.	.	.	I	K	A
Query Conservation																																																																											.	.	.	.
Alig confidence																												.																									.	.	.	.	.	.																	.	.	.	.
Template Conservation																												.																									.	.	.	.	.	.
Template Sequence		S	T	D	A	T	I	G	A	F	S	S	L	D	R	I	C	R	A	I	D	Y	I	D	A	T	A	.	S	H	S	R	A	F	I	V	E	V	M	G	R	H	C	G	W	L	G	L	L	A	G	L	.	.	.	.	.	.	A	T	S	A	D	Y	I	L	I	P	E	K	P	A	S	S	R	E	W	Q	D	Q	M
Template Known Secondary structure		S		S	S																				S			.			S										S	S											.	.	.	.	.	.		T	T		S					T	T	S				S	S
Template Predicted Secondary structure																												.																									.	.	.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.							.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.									.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.													.
Query SS confidence																									.	.	.	.	.	.	.	.													.
Query Sequence		L	D	V	A	T	N	V	L	Q	R	N	P	N	I	K	A	I	Y	C	A	N	D	T	.	.	.	.	.	.	.	.	M	A	M	G	V	A	Q	A	V	A	N	A	.	G	K	T	G	K	V	L	V	V	G	T	D	G	I	P	E	A	R	K	M	V	E	A	G	Q	M	T	A	T	V	A	Q	N	P	A	D
Query Conservation																									.	.	.	.	.	.	.	.													.
Alig confidence																									.	.	.	.	.	.	.	.													.											.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.
Template Sequence		C	D	I	V	G	K	H	R	A	R	G	K	R	K	T	I	V	I	V	A	E	G	A	I	S	N	D	L	S	P	I	S	C	D	Q	V	K	D	V	L	V	N	R	L	G	L	D	T	R	V	T	T	L	G	.	.	.	.	.	.	.	.	H	V	Q	R	G	G	T	A	V	A	F	D	R	I	Y	A	T	L
Template Known Secondary structure												T										T	T		B		T	T			B													T	S										G	.	.	.	.	.	.	.	.	G	G	G	T		S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.									.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		275	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	T	G	L	K	L	M	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	V	E	A	V	N	A	V	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions