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Job DescriptionP39265
Confidence100.00%DateThu Jan 5 11:58:38 GMT 2012
Rank27Aligned Residues268
% Identity18%Templatec3k4hA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator laci from2 bacillus cereus subsp. cytotoxis nvh 391-98
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  AAAEYAVVLKT. . . . . LSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLV
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Template Sequence  TTKTLGLVXPSSASKAFQNPFFPEVIRGISSFAHVEGYALYXS. . TGETEEEIFNGVVKXVQGRQIGGIILLYSREND. .
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Query Sequence  MPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNG
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Template Sequence  RIIQYLHEQNFPFVLI. . . . . . . GKPYDRKDEITYVDNDNYTAAREVAEYLIS. . . LGHKQIAFIGGGSDLLVTRDRLAG
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Query Sequence  ATEAFKKAS. QIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG. . KTGKVLVVGTDGIPE
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Template Sequence  XSDALKLADIVLPKEYILHFDFSRESGQQAVEELXGLQQPPTAIXATDDLIGLGVLSALSKKGFVVPKDVSIVSFNNALL
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   153......160.........170.........180.........190.........200.........210.........220.........230..
 
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Query Sequence  ARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSI
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Template Sequence  SEIASPP. . . LSTVDVNIYQLGYEAAKALVDKVENAESTAKCIIIPHKLLKRQ
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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