Job Description P39265 Confidence 33.78% Date Thu Jan 5 11:58:38 GMT 2012 Rank 196 Aligned Residues 63 % Identity 11% Template c3k2dA_ PDB info PDB header:immune system Chain: A: PDB Molecule:abc-type metal ion transport system, periplasmic component; PDBTitle: crystal structure of immunogenic lipoprotein a from vibrio vulnificus Resolution 2.60 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	S	A	F	A	A	A	E	Y	A	V	V	L	K	T	L	S	N	P	F	W	V	D	M	K	K	G	I	E	D	E	A	K	T	L	G	V	S	V	D	I	F	A	S	P	S	E	G	D	F	Q	S	Q	L	Q	L	F	E	D	L	S	N	K	N	Y	K	G	I	A	F	A	P
Query Conservation
Alig confidence															.																	.	.	.																		.	.	.	.	.	.
Template Conservation															.																	.	.	.																		.	.	.	.	.	.
Template Sequence		G	H	M	D	T	S	K	V	K	V	G	V	M	.	A	G	A	E	A	Q	V	A	E	V	A	A	K	V	A	K	.	.	.	E	K	Y	G	L	D	V	E	L	V	T	F	T	D	Y	V	T	.	.	.	.	.	.	P	N	A	A	L	D	D	G	S	I	D	M	N	A	F	Q	H
Template Known Secondary structure				S											.	T	T															.	.	.													S		T	T	S	.	.	.	.	.	.								T	S		S
Template Predicted Secondary structure															.																	.	.	.																		.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions