Job Description P39265 Confidence 98.83% Date Thu Jan 5 11:58:38 GMT 2012 Rank 74 Aligned Residues 236 % Identity 11% Template c3i45A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:twin-arginine translocation pathway signal protein; PDBTitle: crystal structure of putative twin-arginine translocation pathway2 signal protein from rhodospirillum rubrum atcc 11170 Resolution 1.36 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.									.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																		.																		.	.	.	.	.	.	.	.
Query SS confidence																		.																		.	.	.	.	.	.	.	.
Query Sequence		A	F	A	A	A	E	Y	A	V	V	L	K	T	L	S	N	.	P	F	W	V	D	M	K	K	G	I	E	D	E	A	K	T	L	.	.	.	.	.	.	.	.	G	V	S	V	D	I	F	A	S	P	S	E	G	D	F	Q	S	Q	L	Q	L	F	E	D	L	S	N	K	N	Y	K	G	I	A	F	A	P	L
Query Conservation																		.																		.	.	.	.	.	.	.	.
Alig confidence																		.																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	E	A	I	R	I	G	E	I	N	S	Y	S	Q	I	P	A	F	T	L	P	Y	R	N	G	W	Q	L	A	V	E	Q	I	N	A	A	G	G	L	L	G	G	R	P	L	E	V	I	S	R	D	D	G	G	D	P	G	K	A	V	T	A	A	Q	E	L	L	T	R	H	G	V	H	A	L	A	G	T	F
Template Known Secondary structure														T	T	T																						T	T		B	T	T	T	B										T	T																			S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	V	N	L	V	M	P	V	A	R	A	W	K	K	G	I	Y	L	V	N	L	D	E	K	I	D	M	D	N	L	K	K	A	G	G	N	V	E	A	F	V	T	T	D	N	V	A	V	G	A	K	G	A	S	F	I	I	D	K	L	G	A	E	G	G	E	V	A	I	I	E	G	K	A	G	N	A	S	G
Query Conservation
Alig confidence																								.																																					.	.	.											.	.
Template Conservation																								.																																					.	.	.											.	.
Template Sequence		L	S	H	V	G	L	A	V	S	D	F	A	R	Q	R	K	V	L	F	M	A	S	.	E	P	L	T	D	A	L	T	W	E	K	G	N	R	Y	T	Y	R	L	R	P	S	T	Y	M	Q	A	A	M	L	A	A	E	A	A	K	.	.	.	L	P	I	T	R	W	A	T	I	A	.	.	P	N	Y	E	Y	G
Template Known Secondary structure		S															T							.	S				G	G	G	T	T	T	T			T	T					S															T	T	.	.	.	S	S									.	.		S	S
Template Predicted Secondary structure																								.																																					.	.	.											.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	R	R	N	G	A	T	E	A	F	K	K	A	S	Q	I	K	L	V	A	S	Q	P	A	D	W	D	R	I	K	A	L	D	V	A	T	N	V	L	Q	R	N	P	N	I	K	A	I	Y	C	A	N	D	T	M	A	M	G	V	A	Q	A	V	A	N	A	G	K	T	G	K	V	L	V	V	G	T	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	A	V	A	R	F	K	E	L	L	L	A	A	R	P	E	V	T	F	V	A	E	Q	W	P	A	L	Y	K	L	D	A	G	P	T	V	Q	A	L	Q	Q	A	E	P	E	G	L	F	N	V	L	F	G	A	D	L	P	K	F	V	R	E	G	R	V	R	G	L	F	A	G	R	Q	V	V	S	M	L	T
Template Known Secondary structure																	T	T											T	T														T			S								T	T													T	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	E	A	R	K	M	V	E	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	P	E	Y	L	N	P	L	K	D
Template Known Secondary structure			S					G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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