Return to main results Retrieve Phyre Job Id

Job DescriptionP39265
Confidence54.80%DateThu Jan 5 11:58:38 GMT 2012
Rank169Aligned Residues121
% Identity18%Templatec2ywxA_
PDB info PDB header:lyaseChain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase catalytic subunit; PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase2 catalytic subunit from methanocaldococcus jannaschii
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  YAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKK
Query Conservation 



       
      

   
   
    
       
       
  
     
 

                   
Alig confidence 









...




































...


























Template Conservation 
 

 

 

...      
   
   

  

 
 



    
     ...     



 

  
 





  
  
Template Sequence  ICIIMGSESD. . . LKIAEKAVNILKEFGVEFEVRVASAHRTPELVEEIVK. . . NSKADVFIAIAGLAAHLPGVVASLTTK
Template Known Secondary structure  SSGGG...TT



TTT
...


SSS

TT
SS
Template Predicted Secondary structure 




...







...












Template SS confidence 















































































   2.......10. ........20.........30.........40........ .50.........60.........70.....
 
   107..110.........120.. .......130.........140.........150...
Predicted Secondary structure 










.....












Query SS confidence 















. . . . .






























Query Sequence  GIYLVNLDEKIDMDNL. . . . . KKAGGNVEAFVTTDNVAVGAKGASFIIDKLG
Query Conservation   
              .....          
  
                 
Alig confidence 















.....






























Template Conservation 





      
 




 



 
 




 

   


  
  

   
Template Sequence  PVIAVPVDAKLDGLDALLSSVQMPPGIPVATVGIDRGENAAILALEILALKD
Template Known Secondary structure 

SSGGGS

TTS



TT
TTT
Template Predicted Secondary structure 





















Template SS confidence 



















































   76...80.........90.........100.........110.........120.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions