Job Description P39265 Confidence 25.09% Date Thu Jan 5 11:58:38 GMT 2012 Rank 220 Aligned Residues 177 % Identity 9% Template c1nm3B_ PDB info PDB header:electron transport Chain: B: PDB Molecule:protein hi0572; PDBTitle: crystal structure of heamophilus influenza hybrid-prx5 Resolution 2.80 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	L	F	E	D	L	S	N	K	N	Y	K	G	I	A	F	A	P	L	S	S	V	N	L	V	M	P	V	A	R	A	W	K	K	G	I	Y	L	V	N	L	D	E	K	I	D	M	D	N	L	K	K	A	G	G	N	V	E	A	F	V	T	T	D	N	V	A	V	G	A	K	G	A	S	F	I	I	D	K
Query Conservation
Alig confidence																																																								.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.
Template Sequence		N	E	L	A	P	V	F	K	K	Y	G	V	D	D	I	L	V	V	S	V	N	D	T	F	V	X	N	A	W	K	E	D	E	K	S	E	N	I	S	F	I	P	D	G	N	G	E	F	T	E	G	X	G	X	.	.	.	.	.	.	L	V	G	K	E	D	L	G	F	G	K	R	S	W	R	Y	S	X	L	V
Template Known Secondary structure											T	T									S	S													T		T	T	S						T	T	S						T	T		.	.	.	.	.	.					T	T	T	T							S
Template Predicted Secondary structure																																																								.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	A	E	G	G	E	V	A	I	I	E	G	K	A	G	N	A	S	G	E	A	R	R	N	G	A	T	E	A	F	K	K	A	S	Q	I	K	L	V	A	S	Q	P	A	D	W	D	R	I	K	A	L	D	V	A	T	N	V	L	Q	R	N	P	N	I	K	A	I	Y	C	A	N	D	T	M	A	M	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	G	V	V	E	K	X	F	I	E	P	N	E	P	G	D	P	F	K	V	S	D	A	D	T	X	L	K	Y	L	A	P	Q	H	Q	V	Q	E	S	I	S	I	F	T	K	P	G	C	P	F	C	A	K	A	K	Q	L	L	H	D	K	G	L	S	F	E	E	I	I	L	G	H	D	A	T	I	V	S	V
Template Known Secondary structure			T	T										S		S	S		S		S	S	S	S										T	T													S	S													T	T	T								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		232	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		A	Q	A	V	A	N	A	G	K	T	.	.	.	.	G	K	V	L	V	V	G	T	D	G	I	P	E
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.
Template Conservation
Template Sequence		R	A	V	S	G	R	T	T	V	P	Q	V	F	I	G	G	K	H	I	G	G	S	D	D	L	E	K
Template Known Secondary structure						S		S	S	S						T	T					S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions