Return to main results Retrieve Phyre Job Id

Job DescriptionP76268
Confidence95.81%DateWed Jan 25 15:21:07 GMT 2012
Rank169Aligned Residues52
% Identity15%Templated2g9wa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30 .........40.. .......50.........60.........70..
Predicted Secondary structure 


.



....











Query SS confidence 










.











. . . .





























Query Sequence  FGILQALGEER. EIGITELSQRVM. . . . MSKSTVYRFLQTMKTLGYVAQEGESEKYSL
Query Conservation 
 

  

   .   




  

....
  

  


 

   
 
        
 
Alig confidence 










.











....




















.







Template Conservation   


 


      
  

 
 
        


 
 
 

  

 
  .

   
  
Template Sequence  RAVXDHLWSRTEPQTVRQVHEALSARRDLAYTTVXAVLQRLAKKNLVLQ. IRAHRYAP
Template Known Secondary structure  T
SS
TTT



TTS.


Template Predicted Secondary structure 













.


Template SS confidence 

























































   12.......20.........30.........40.........50.........60 ........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions