Return to main results Retrieve Phyre Job Id

Job DescriptionP76268
Confidence84.93%DateWed Jan 25 15:21:07 GMT 2012
Rank443Aligned Residues45
% Identity22%Templated1q1ha_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcription factor E/IIe-alpha, N-terminal domain
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920...... ...30.........40.........50.........60...
Predicted Secondary structure  .











Query SS confidence 







.




































Query Sequence  VFGILQAL. GEEREIGITELSQRVMMSKSTVYRFLQTMKTLGYVAQ
Query Conservation 

 

  
.
      




  


  

  


 

   
 
  
Alig confidence 







.




































Template Conservation 
  
   
     
 






  




 


 

 


  

 
Template Sequence  VIDVLRILLDKGTEMTDEEIANQLNIKVNDVRKKLNLLEEQGFVSY
Template Known Secondary structure  T
S
B
TTTS
TS
Template Predicted Secondary structure 











Template SS confidence 













































   20.........30.........40.........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions