Job Description P76268 Confidence 89.09% Date Wed Jan 25 15:21:07 GMT 2012 Rank 295 Aligned Residues 49 % Identity 14% Template d1ku3a_ SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		D	L	D	K	Q	P	D	S	V	S	S	V	L	K	V	F	G	I	L	Q	A	.	L	G	E	E	R	E	I	G	I	T	E	L	S	Q	R	V	M	M	S	K	S	T	V	Y	R	F	L	Q
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		E	L	E	K	A	L	S	K	L	S	E	R	E	A	M	V	L	K	M	R	K	G	L	I	D	G	R	E	H	T	L	E	E	V	G	A	Y	F	G	V	T	R	E	R	I	R	Q	I	E	N
Template Known Secondary structure				S	S	S	T	T	T	S													T	T	T	T	S	S												T
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions