Job Description P76268 Confidence 93.56% Date Wed Jan 25 15:21:07 GMT 2012 Rank 220 Aligned Residues 82 % Identity 15% Template c3m1eA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional regulator benm; PDBTitle: crystal structure of benm_dbd Resolution 1.80 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		K	V	F	G	I	L	Q	A	L	G	E	E	R	E	I	G	I	T	E	L	S	Q	R	V	M	M	S	K	S	T	V	Y	R	F	L	Q	T	M	K	T	L	.	G	Y	V	A	Q	E	G	E	S	E	K	Y	S	L	T	L	K	L	F	E	L	G	A	R	A	L	Q	N	V	D	L	I	R	S	A	D	I	Q
Query Conservation																																											.
Alig confidence															.	.																											.
Template Conservation															.	.
Template Sequence		R	H	L	R	Y	F	V	A	V	V	E	E	Q	.	.	S	F	T	K	A	A	D	K	L	C	I	A	Q	P	P	L	S	R	Q	I	Q	N	L	E	E	E	L	G	I	Q	L	L	E	R	G	S	R	P	V	K	T	T	P	E	G	H	F	F	Y	Q	Y	A	I	K	L	L	S	N	V	D	Q	M	V	S	M
Template Known Secondary structure														T	.	.									T	T	S																	T	S			B		T	T		S	S			B
Template Predicted Secondary structure															.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		97	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	E	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	R	I	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions