Job Description P76268 Confidence 92.52% Date Wed Jan 25 15:21:07 GMT 2012 Rank 243 Aligned Residues 73 % Identity 19% Template c3jyvT_ PDB info PDB header:ribosome Chain: T: PDB Molecule:s19e protein; PDBTitle: structure of the 40s rrna and proteins and p/e trna for eukaryotic2 ribosome based on cryo-em map of thermomyces lanuginosus ribosome at3 8.9a resolution Resolution 8.90 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.															.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	F	G	I	L	Q	A	L	G	E	E	R	E	I	G	I	T	E	L	S	Q	R	V	M	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	S	T	V	Y	R	F	L	Q	T	M	K	T	L	G	Y	V	A	Q	E	G	E	S	E	K	Y	S	L	T	L	K	L	F	E	L	G	A	R	A
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.							.	.	.	.	.	.	.
Template Conservation																																																																				.							.	.	.	.	.	.	.
Template Sequence		R	A	A	S	V	A	R	H	I	Y	M	R	K	Q	V	G	V	G	K	L	N	K	L	Y	G	G	A	K	S	R	G	V	R	P	Y	K	H	I	D	A	S	G	S	I	N	R	K	V	L	Q	A	L	E	K	I	G	I	V	E	I	S	P	K	G	G	R	.	R	I	S	E	N	G	.	.	.	.	.	.	.
Template Known Secondary structure													T			S		S	G	G	G	T	S	S	S	S			T	T	T				S	S	S																		T	T	T	S			B		T	T	S	S	B	.							.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.							.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	N	V	D	L	I	R	S	A	D	I	Q	M	R	E	L
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	Q	R	D	L	D	R	I	A	A	Q	T	L	E	E	D
Template Known Secondary structure		.	.
Template Predicted Secondary structure		.	.
Template SS confidence
				129	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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