Return to main results Retrieve Phyre Job Id

Job DescriptionP76268
Confidence88.54%DateWed Jan 25 15:21:07 GMT 2012
Rank315Aligned Residues46
% Identity13%Templatec2pbxB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:hemagglutinin/protease regulatory protein; PDBTitle: vibrio cholerae hapr
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20..... ....30 .........40.........50.
Predicted Secondary structure 





....


..





Query SS confidence 



















. . . .




. .




















Query Sequence  LDKQPDSVSSVLKVFGILQA. . . . LGEER. . EIGITELSQRVMMSKSTVYRF
Query Conservation         
 

 


 

  ....

   ..   




  


  

  

Alig confidence 



















....




..




















Template Conservation    
   
   
  
  

 

  

   
    

  

  



  


  
Template Sequence  EKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNY
Template Known Secondary structure 









TTS

TS
Template Predicted Secondary structure 




















Template SS confidence 



















































   6...10.........20.........30.........40.........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions