Job Description P76268 Confidence 100.00% Date Wed Jan 25 15:21:07 GMT 2012 Rank 6 Aligned Residues 239 % Identity 26% Template c2o0yB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator rha1_ro069532 (iclr-family) from rhodococcus sp. Resolution 2.00 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		S	V	S	S	V	L	K	V	F	G	I	L	Q	A	L	G	E	E	R	.	E	I	G	I	T	E	L	S	Q	R	V	M	M	S	K	S	T	V	Y	R	F	L	Q	T	M	K	T	L	G	Y	V	A	Q	E	G	E	S	E	K	Y	S	L	T	L	K	L	F	E	L	G	A	R	A	L	Q	N	V	D	L	I
Query Conservation																					.
Alig confidence																					.																																				.
Template Conservation																																																									.
Template Sequence		G	V	R	S	V	T	R	V	I	D	L	L	E	L	F	D	A	A	H	P	T	R	S	L	K	E	L	V	E	G	T	K	L	P	K	T	T	V	V	R	L	V	A	T	X	C	A	R	S	V	L	T	S	R	A	.	D	G	S	Y	S	L	G	P	E	X	L	R	W	V	R	L	A	G	R	T	W	A	P	P
Template Known Secondary structure														T	T		B	T	T	B	S												T																T	T	S					T	.	T	S						G	G	G	G	G	G
Template Predicted Secondary structure																																																									.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	A	D	I	Q	M	R	E	L	S	R	L	T	K	E	T	I	H	L	G	A	L	D	E	D	S	I	V	Y	I	H	K	I	D	S	M	Y	N	L	R	M	Y	S	R	I	G	R	R	N	P	L	Y	S	T	A	I	G	K	V	L	L	A	W	R	D	R	D	E	V	K	Q	I	L	E	G	V	E	Y	K
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		E	E	V	V	D	I	X	R	Q	L	S	A	D	T	G	E	T	V	N	L	Y	I	R	Q	G	L	S	R	V	V	V	A	Q	C	E	S	T	A	T	V	R	S	V	I	P	L	G	V	P	Y	P	L	W	A	G	A	A	G	K	I	L	L	L	A	A	P	E	L	I	D	D	V	A	A	D	.	.	.	.	.
Template Known Secondary structure																S	S									T	T											S		S	S						T	T					S	S	S	S							G	G	G		G	G	G								.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	T	E	R	T	I	T	S	T	E	A	L	L	P	V	L	D	Q	V	R	E	Q	G	Y	G	E	D	N	E	E	Q	E	E	G	L	R	C	I	A	V	P	V	F	D	R	F	G	V	V	I	A	G	L	S	I	S	F	P	T	L	R	F	S	E	E	R	L	Q	E	Y	V	A	M	L	H	T	A	A	R
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	S	P	H	G	P	E	F	A	D	Q	L	R	E	K	V	E	D	G	R	E	R	G	Y	Q	L	V	H	G	E	R	E	L	G	S	S	G	L	S	F	P	L	V	D	S	H	G	T	V	V	A	A	L	T	L	G	G	P	T	G	R	F	T	E	D	R	T	P	H	Y	I	E	C	T	R	A	A	A	E
Template Known Secondary structure		.	.	S	S	S		T	T																S	S					S	S	S	S	T	T											T	T													G	G	G	S		T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	S	A	Q	M	G	Y	H
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		E	I	S	.	A	I	G	L	P
Template Known Secondary structure					.					T
Template Predicted Secondary structure					.
Template SS confidence
		250	.	.		.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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