Job Description P76268 Confidence 100.00% Date Wed Jan 25 15:21:07 GMT 2012 Rank 2 Aligned Residues 248 % Identity 30% Template c2g7uB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: 2.3 a structure of putative catechol degradative operon regulator from2 rhodococcus sp. rha1 Resolution 2.30 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		P	D	S	V	S	S	V	L	K	V	F	G	I	L	Q	A	L	G	E	E	R	.	E	I	G	I	T	E	L	S	Q	R	V	M	M	S	K	S	T	V	Y	R	F	L	Q	T	M	K	T	L	G	Y	V	A	Q	E	G	E	S	E	K	Y	S	L	T	L	K	L	F	E	L	G	A	R	A	L	Q	N	V	D
Query Conservation																							.
Alig confidence																							.																																			.	.
Template Conservation																																																										.	.
Template Sequence		R	D	Y	I	Q	S	I	E	R	G	F	A	V	L	L	A	F	D	A	Q	R	P	N	P	T	L	A	E	L	A	T	E	A	G	L	S	R	P	A	V	R	R	I	L	L	T	L	Q	K	L	G	Y	V	A	G	S	.	.	G	G	R	W	S	L	T	P	R	V	L	S	I	G	Q	H	Y	S	E	S	H	A
Template Known Secondary structure																	T		B	T	T	B		S		B									T																T	T	S					.	.	T	T						T												T
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	R	S	A	D	I	Q	M	R	E	L	S	R	L	T	K	E	T	I	H	L	G	A	L	D	E	D	S	I	V	Y	I	H	K	I	D	S	M	Y	N	L	R	M	Y	S	R	I	G	R	R	N	P	L	Y	S	T	A	I	G	K	V	L	L	A	W	R	D	R	D	E	V	K	Q	I	L	E	G	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	E	A	A	X	P	R	L	L	E	V	A	E	K	T	Q	E	S	A	S	L	G	V	L	D	G	A	D	V	V	Y	A	A	R	V	P	V	R	R	I	X	S	I	N	V	S	V	G	T	R	V	P	A	Y	A	T	S	X	G	R	A	L	L	A	W	A	P	A	D	V	V	E	R	V	V	A	E	S	T
Template Known Secondary structure																		S	S									T	T													S	S						T	T					S	T	T	S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		Y	K	R	S	T	E	R	T	I	T	S	T	E	A	L	L	P	V	L	D	Q	V	R	E	Q	G	Y	G	E	D	N	E	E	Q	E	E	G	L	R	C	I	A	V	P	V	F	D	R	F	G	V	V	I	A	G	L	S	I	S	F	P	T	L	R	F	S	E	E	R	.	L	Q	E	Y	V	A	M	L	H	T
Query Conservation																																																																							.
Alig confidence																																																																							.
Template Conservation
Template Sequence		F	Q	K	L	G	P	E	T	I	G	T	A	A	E	L	E	R	E	L	A	K	V	R	E	Q	G	F	A	L	T	S	E	E	L	E	K	G	L	I	S	L	A	A	P	V	H	D	A	G	G	T	V	V	G	V	V	A	C	S	T	S	S	A	R	N	T	P	A	Q	F	R	E	Q	A	V	P	C	V	L	A
Template Known Secondary structure						S	T	T																			S	S					S	S	S	S	T	T											T	T	S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	K	I	S	A	Q	M	G	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	A	A	L	S	A	D	X	G	F	A
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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