Job Description P76268 Confidence 97.34% Date Wed Jan 25 15:21:07 GMT 2012 Rank 104 Aligned Residues 103 % Identity 12% Template c2e1cA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex Resolution 2.10 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	I	L	Q	A	L	G	E	E	R	E	I	G	I	T	E	L	S	Q	R	V	M	M	S	K	S	T	V	Y	R	F	L	Q	T	M	K	T	L	G	Y	V	A	Q	E	G	E	S	E	K	Y	S	L	T	L	K	L	F	E	L	G	A	R	A	L	Q	N	V	D	L	I	R	S	A	D	I	Q	M	R	E
Query Conservation
Alig confidence																																														.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		K	K	I	I	K	I	L	Q	N	D	G	K	A	P	L	R	E	I	S	K	I	T	G	L	A	E	S	T	I	H	E	R	I	R	K	L	R	E	S	G	V	I	K	K	.	.	.	.	F	T	A	I	I	D	P	E	A	L	G	Y	S	M	L	A	F	I	L	V	K	V	K	A	G	K	Y	S	E	V	A	S
Template Known Secondary structure												T	T											T	S															T	T	S	S			.	.	.	.							G	G	G	G	T													T	T
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		L	S	R	L	T	K	E	T	I	H	L	G	A	L	D	E	D	S	.	I	V	Y	I	H	K	I	D	S
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		N	L	A	K	Y	P	E	I	V	E	V	Y	E	T	T	G	D	Y	D	M	V	V	K	I	R	T	K	N
Template Known Secondary structure					T	S	T	T								S	S	S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions