Job Description P76268 Confidence 97.40% Date Wed Jan 25 15:21:07 GMT 2012 Rank 99 Aligned Residues 221 % Identity 14% Template c1stzB_ PDB info PDB header:transcription Chain: B: PDB Molecule:heat-inducible transcription repressor hrca homolog; PDBTitle: crystal structure of a hypothetical protein at 2.2 a resolution Resolution 2.20 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.					30		.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.
Predicted Secondary structure															.	.	.	.		.											.	.																																								.	.	.	.	.
Query SS confidence															.	.	.	.		.											.	.																																								.	.	.	.	.
Query Sequence		L	K	V	F	G	I	L	Q	A	L	G	E	E	.	.	.	.	R	.	E	I	G	I	T	E	L	S	Q	R	.	.	V	M	M	S	K	S	T	V	Y	R	F	L	Q	T	M	K	T	L	G	Y	V	A	Q	E	G	E	S	E	K	Y	S	L	T	L	K	L	F	E	L	.	.	.	.	.	G	A	R	A	L
Query Conservation															.	.	.	.		.											.	.																																								.	.	.	.	.
Alig confidence															.	.	.	.		.											.	.																																								.	.	.	.	.
Template Conservation
Template Sequence		D	R	Q	R	K	V	L	Y	C	I	V	R	E	Y	I	E	N	K	K	P	V	S	S	Q	R	V	L	E	V	S	N	I	E	F	S	S	A	T	I	R	N	D	M	K	K	L	E	Y	L	G	Y	I	Y	Q	P	H	T	S	A	G	R	I	P	T	D	K	G	L	R	F	Y	Y	E	E	M	L	K	I	S	M
Template Known Secondary structure																				S		B									S				S															T	T	S					S	S		S		B
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Query Sequence		Q	N	V	D	L	I	R	S	A	D	I	Q	M	R	E	L	S	R	L	T	K	E	T	I	H	L	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	E	D	S	I	V	Y	I	H	K	I	D	S	M	Y	N	L	R	M	Y	S	R	I	G	R	R	N	P	.	.	.	.	.	.	.	.
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	A	D	P	E	K	V	L	F	L	A	G	N	L	L	A	R	L	T	E	G	Y	V	L	I	E	R	P	N	T	R	D	L	K	I	L	R	V	M	L	I	P	V	S	E	D	Y	L	I	F	S	I	L	T	E	F	G	V	S	K	V	T	P	I	K	T	Q	E	R	L	N	W	E	E	I	E	R	Q	L
Template Known Secondary structure																						T										T	T	S		B										S	S	S									T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
																																									142	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	S	T	A	I	G	K	V	L	L	A	.	W	R	D	R	D	E	V	K	Q	I	L	E	G	V	E	Y	K	R	S	T	E	R	T	I	T	S	T	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	F	L	L	R	G	R	T	V	G	E	V	L	M	G	K	I	E	S	L	K	G	S	G	F	L	R	L	I	E	S	L	I	G	E	T	V	E	R	Y	L	D	A	G	L	E	N	L	L	K	D	E	T	L	T	L	E	D	I	R	N	L	L	E	E	V	K	D	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T		B						T	T			G	G	G	G	S	S											T					S												S	T	T													T	T		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		A	L	L	P	V	L	D	Q	V	R	E	Q	G	Y	G	E	D	N	E	E	Q	E	.	.	.	.	.	E	G	L	R	C	I	A	V	P	V	F	D	R	F	G	V	V	I	A	G	L	S	I	S	F	P	T	L	R	F	S	E	E	R	L	Q	E	Y	V	A	M	L	H	T	A	A	R	K	I	S	A	Q	M
Query Conservation																								.	.	.	.	.
Alig confidence		.	.																					.	.	.	.	.												.																.			.	.	.
Template Conservation		.	.																																					.																.			.	.	.
Template Sequence		.	.	Q	K	F	L	E	S	L	V	G	E	G	I	T	V	R	I	G	R	E	I	G	R	K	K	L	E	K	F	A	V	F	S	G	K	Y	F	.	K	G	E	S	P	I	G	S	V	Y	L	F	T	S	K	.	V	T	.	.	.	K	Y	D	R	N	H	R	V	F	E	Y	I	L	N	R	L	S	E	Y	F
Template Known Secondary structure		.	.										S	S	S					G	G	G	G	S		G	G	G	T	T										.		T	T												S	.	S	S	.	.	.
Template Predicted Secondary structure		.	.																																					.																.			.	.	.
Template SS confidence
				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.				.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions