 |
Job Description | P77136 | Confidence | 2.98% | Date | Thu Jan 5 12:25:36 GMT 2012 |
Rank | 29 | Aligned Residues | 49 |
% Identity | 33% | Template | c1fpvA_ |
PDB info |
PDB header:virus | Chain: A: PDB Molecule:feline panleukopenia virus (strain b) viral |
PDBTitle: structure determination of feline panleukopenia virus empty2 particles
|
Resolution | 3.30 Å |
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | F | L | N | A | E | N | V | L | T | Q | T | T | S | W | T | L | N | S | R | Y | V | N | V | N | S | V | N | K | V | N | V | K | S | K | V | K | N | S | Y | I | S | R | S | V | N | D | E | F | S | L | T | D |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | F | L | E | N | G | W | V | E | I | T | A | N | S | . |
. |
. |
. |
S | R | L | V | H | L | N | M | P | E | S | E | N | Y | K | R | V | V | V | N | N | M | D | K | T | A | V | K | G | N | M | A | L | D | D |
Template Known Secondary structure |   |
 |  |
| S | S | S |  |  |  |  |  |  |  |
| . | . | . | . |
|  |  |  |  |  |
|
|
| S |
| S | S |
|
|
|  |  |
|
|
| T | T | T | S | S | S | S | S |
|
| S |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|