Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEI4
Confidence37.45%DateThu Jan 5 11:23:25 GMT 2012
Rank184Aligned Residues147
% Identity10%Templated1j93a_
SCOP infoTIM beta/alpha-barrel UROD/MetE-like Uroporphyrinogen decarboxylase, UROD
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   172.......180.........190.........200.........210.........220.........230.........240.........250.
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  GEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLM
Query Conservation 
 
  

  
   
 


 
 
     

 
                
  

  
       
     
     


  
Alig confidence 




































.......

























..







Template Conservation             




 
 
 
     


  
 

 ....... 
  
 
   

  
    


 

 ..        
Template Sequence  TSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFS. . . . . . . LPYLKQIVDSVKLTHPNLPLILYASG. . SGGLLERL
Template Known Secondary structure  TT
S
GGGGGS
T.......STT


SS..
TTTGGGG
Template Predicted Secondary structure 








.......






..
Template SS confidence 















































































   192.......200.........210.........220........ .230.........240.........250.... .....260..
 
   252.......260.........270........ .280.........290.........300.........310..... ..
Predicted Secondary structure 













.............










.
Query SS confidence 


























. . . . . . . . . . . . .




































.

Query Sequence  AEGKILPYLDIPLQHASPRILKLMKRP. . . . . . . . . . . . . GSVDRQLARIKQWREICPELTLRSTFIVGFPGETEED. FQ
Query Conservation     

   
 






  


 
 
 ............. 
 
     
         
 
   



 



 

.  
Alig confidence 



.





















.............




































.

Template Conservation     
.      
   

       
    
 



  

 

 


   
   
      
 

  

 

  

 


 
Template Sequence  PLTG. VDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSKEFITNRINDTVKKAGKGKHILNLGHGIKVGTPEENFA
Template Known Secondary structure  GGG
.
S

TTS
T
SSS

B
GGGGGS

SSSB
BSS


TT

Template Predicted Secondary structure 

.































Template SS confidence 















































































   263... ...270.........280.........290.........300.........310.........320.........330.........340.
 
   318.320........
Predicted Secondary structure 


Query SS confidence 










Query Sequence  MLLDFLKEARL
Query Conservation   

  
  
  
Alig confidence 










Template Conservation 
 
 
     
Template Sequence  HFFEIAKGLRY
Template Known Secondary structure  T


Template Predicted Secondary structure 



Template SS confidence 










   342.......350..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions