 |
Job Description | P0AEI4 | Confidence | 58.60% | Date | Thu Jan 5 11:23:25 GMT 2012 |
Rank | 104 | Aligned Residues | 71 |
% Identity | 13% | Template | d1gpma2 |
SCOP info | Flavodoxin-like
| Class I glutamine amidotransferase-like
| Class I glutamine amidotransferases (GAT)
|
Resolution | 2.20 |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | T | P | Q | P | K | I | G | F | V | S | L | G | C | P | K | N | L | V | D | S | E | R | I | L | T | E | L | R | T | E | G | Y | D | V | V | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | Y | D | D | A | D | M | V | I | V | N | T | C | G | F | I | D | S | A | V | Q | E | S | L | E | A | I | G | E | A | L | N |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|   |
|
|
|   |
|   |   | . |   | . | . | . |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
| . |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
E | N | I | H | K | H | R | I | L | I | L | D | F | G | S | Q | . |
Y | . |
. |
. |
T | Q | L | V | A | R | R | V | R | E | L | G | V | Y | C | E | L | W | A | W | D | V | T | E | A | Q | I | R | D | F | N | P | S | G | I | I | L | . |
S | G | G | P | E | S | T | T | E | E | N | S | P | R | A | P | Q | Y | V | F | E |
Template Known Secondary structure |   |
|
| T | T | S | S |  |  |  |  |  |  |
| S |
| T | . | T | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  |
|
| S |  |  |  |  | . |
|
|
| S | S |
| T | T | S | T | T |
|
|
|
|
| G | G | G | G | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
. | |
|
|
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
  |
  |   |
73 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
E | N | G | K | V | I |
Query Conservation |   |
  |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
Template Sequence |   |
A | G | V | P | V | F |
Template Known Secondary structure |   |
S | S | S |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|