Job Description P0AEI4 Confidence 99.80% Date Thu Jan 5 11:23:25 GMT 2012 Rank 7 Aligned Residues 209 % Identity 15% Template c3rfaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase n; PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine Resolution 2.05 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.											.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	L	T	P	R	H	Y	A	Y	L	K	I	S	E	G	C	N	H	R	C	T	F	C	I	I	P	S	M	R	G	D	L	V	S	R	P	I	G	E	V	L	S	E	A	K	R	L	V	D	.	.	.	.	.	.	.	.	.	.	A	G	V	K	E	I	L	V	I	S	Q	D	T	S	A	Y	G	V	D	V
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.
Alig confidence																															.																					.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																															.																																									.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	E	D	D	R	A	T	L	C	V	S	S	Q	V	G	C	A	L	E	C	K	F	C	S	T	A	Q	Q	.	G	F	N	R	N	L	R	V	S	E	I	I	G	Q	V	W	R	A	A	K	I	V	G	A	A	K	V	T	G	Q	R	P	I	T	N	V	V	M	M	G	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	S													S	S			T	T		G	G	G	T	T	.																													S	S		S		S						S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.																																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.				.	.	.	.
Predicted Secondary structure																														.	.																																												.	.	.
Query SS confidence																														.	.																																												.	.	.
Query Sequence		K	H	R	T	G	F	H	N	G	E	P	V	K	T	S	M	V	S	L	C	E	Q	L	S	K	L	G	I	.	.	W	T	R	L	H	Y	V	Y	P	Y	P	H	V	D	D	V	I	P	L	M	A	E	G	K	I	L	P	Y	L	D	I	P	L	Q	H	A	S	P	R	I	L	K	L	.	.	.	M	K	R	P
Query Conservation																														.	.																																												.	.	.
Alig confidence		.	.	.	.	.																								.	.																									.																			.	.	.
Template Conservation		.	.	.	.	.																																																		.
Template Sequence		.	.	.	.	.	M	G	E	P	L	L	N	L	N	N	V	V	P	A	M	E	I	M	L	D	D	F	G	F	G	L	S	K	R	R	V	T	L	S	T	S	G	V	V	P	A	L	D	K	L	G	D	M	I	.	D	V	A	L	A	I	S	L	H	A	P	N	D	E	I	R	D	E	I	V	P	I	N	K	K
Template Known Secondary structure		.	.	.	.	.	S	S		G	G	G														S	T	T	T	T				G	G	G						S														.											S	S								S	G	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.																																																		.
Template SS confidence
							178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.					.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		G	S	V	D	R	Q	L	A	R	I	K	Q	W	R	E	I	C	P	E	.	.	.	.	L	T	L	R	S	T	F	I	V	G	F	P	G	E	T	E	E	D	F	Q	M	L	L	D	F	L	K	E	A	R	L	D	R	V	G	C	F	K	Y	S	P	V	E	G	A	D	A	N	A	L	P	D	Q	V	P	E	E
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.											.																			.																		.	.	.	.
Template Conservation																																			.																			.																		.	.	.	.
Template Sequence		Y	N	I	E	T	F	L	A	A	V	R	R	Y	L	E	K	S	N	A	N	Q	G	R	V	T	I	E	Y	V	M	L	D	H	.	V	N	D	G	T	E	H	A	H	Q	L	A	E	L	L	K	D	T	.	P	C	K	I	N	L	I	P	W	N	P	F	P	G	A	P	Y	.	.	.	.	G	R	S	S	N	S
Template Known Secondary structure		S																	T	T	T	T	T									B	T	T	.	T	T		S											T	T	T	S	.													T	T				.	.	.	.		B
Template Predicted Secondary structure																																			.																			.																		.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.					320	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	E	E	R	W	N	R	F	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	D	R	F	S	K	V	L	M	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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