Job Description P0AEI4 Confidence 89.48% Date Thu Jan 5 11:23:25 GMT 2012 Rank 35 Aligned Residues 115 % Identity 17% Template c3r0jA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																						.	.							.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.							.	.	.	.	.	.	.	.	.
Query Sequence		V	T	P	Q	P	K	I	G	F	V	S	L	G	C	P	K	N	L	V	D	S	E	R	I	L	T	E	L	R	T	E	G	Y	D	V	V	.	.	P	S	Y	D	D	A	.	.	.	.	.	.	.	.	.	D	M	V	I	V	N	T	C	G	F	I	D	S	A	V	Q	E	S	L	E	A	I	G	E	A	L	N
Query Conservation																																						.	.							.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																							.	.							.	.	.	.	.	.	.	.	.							.		.
Template Conservation												.	.	.	.																																														.		.
Template Sequence		T	T	P	E	A	R	V	L	V	V	.	.	.	.	D	D	E	A	N	I	V	E	L	L	S	V	S	L	K	F	Q	G	F	E	V	Y	T	A	T	N	G	A	Q	A	L	D	R	A	R	E	T	R	P	D	A	V	I	L	D	.	V	.	X	P	G	X	D	G	F	G	V	L	R	R	L	R	A	D	G	I
Template Known Secondary structure				S	S							.	.	.	.		S															T	T							S	S														S						.		.			S	S												T	T
Template Predicted Secondary structure												.	.	.	.																																														.		.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	G	K	V	I	V	T	G	C	L	G	A	K	E	D	Q	I	R	E	V	H	P	K	V	L	E	I	T	G	P	H	S	Y	E	Q	V	L	E	H	V	H	H	Y	V	P	K	P	K	H	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	P	A	L	F	L	T	A	R	D	S	L	Q	D	K	I	A	G	L	T	L	G	G	D	D	Y	V	T	K	P	F	S	L	E	E	V	V	A	R	L	R	V	I	L	R	R	A	G	K	N	V
Template Known Secondary structure											S	T	T									T	S	T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions