Job Description P0AEI4 Confidence 35.70% Date Thu Jan 5 11:23:25 GMT 2012 Rank 191 Aligned Residues 159 % Identity 12% Template c3ngfA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ap endonuclease, family 2; PDBTitle: crystal structure of ap endonuclease, family 2 from brucella2 melitensis Resolution 1.80 Å

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		I	G	E	V	L	S	E	A	K	R	L	V	D	A	G	V	K	E	I	L	V	I	S	Q	D	T	S	A	Y	G	V	D	V	K	H	R	T	G	F	H	N	G	E	P	V	K	T	S	M	V	S	L	C	E	Q	L	S	K	L	G	I	W	T	R	L	H	Y	V	Y	P	Y	P	H	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.																																													.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		R	D	N	V	D	I	A	L	H	Y	A	L	A	L	D	C	R	T	L	H	A	M	.	.	.	.	.	.	.	S	G	I	T	E	G	L	D	R	K	A	C	E	E	T	F	I	E	N	F	R	Y	A	A	D	K	L	A	P	H	G	I	T	V	L	V	E	P	L	N	T	R	N	M	P	G	Y	F	I	V	H
Template Known Secondary structure															T	T								.	.	.	.	.	.	.	B		B		T	T	S																					G	G	G	T										T	T	T	S	T	T	B	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.								.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	D	V	I	P	L	M	A	E	G	K	I	L	P	Y	L	D	I	P	L	Q	H	A	S	P	R	I	L	K	L	M	K	R	P	G	S	V	D	R	Q	L	A	R	I	K	Q	W	R	E	I	C	P	E	L	T	L	R	S	T	F	I	V	G	F	P	G	E	T	E	E	D	F	Q	M	L	L	D	F	L
Query Conservation
Alig confidence														.																		.	.	.	.	.	.	.	.
Template Conservation														.																		.	.	.	.	.	.	.	.
Template Sequence		Q	L	E	A	V	G	L	V	K	R	V	N	.	R	P	N	V	A	V	Q	L	D	L	Y	H	A	Q	I	M	D	.	.	.	.	.	.	.	.	G	D	L	T	R	L	I	E	K	M	N	G	A	F	S	H	V	Q	I	A	S	V	P	D	R	H	E	P	D	E	G	E	L	N	Y	P	Y	L	F	S	V	L
Template Known Secondary structure														.		T	T														T	.	.	.	.	.	.	.	.										T	T	T	S									T	T	T				T	T	S	S	S
Template Predicted Secondary structure														.																		.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.									.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	A	R	L	D	R	V	G	C	F	K	Y	S	P	V	E	G	A	D	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	V	G	Y	R	G	W	V	G	C	E	Y	N	P	R	G	K	T	E	S	G
Template Known Secondary structure				T	T			S									S	S	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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