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Job DescriptionP0AEI4
Confidence63.32%DateThu Jan 5 11:23:25 GMT 2012
Rank86Aligned Residues142
% Identity22%Templatec3itcA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:renal dipeptidase; PDBTitle: crystal structure of sco3058 with bound citrate and glycerol
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   175....180.........190.........200.........210.........220.........230.........240.........250....
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Query Sequence  LSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEG
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Template Sequence  LATLRALYALGVRYMTLTHNDNNAWADSATDEPGVGGLSAFGR. . . EVVREMNREGMLVDLSHVAATTM. RDALDTSTAP
Template Known Secondary structure  TTS
SSS
BTTB
BTTS

SSSSB
...T

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   132.......140.........150.........160.........170.... .....180.........190....... ..200.......
 
   255....260.........270.........280.........290.........300.........310.
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Query Sequence  KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGE. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VIFS. . . . . . . HSSSRAVCDHPRNIPDDV. . . . LERLSAN. . GGMAMVTFVPKFVLQAAVDWTAEADDNMRAHGFHHLDS
Template Known Secondary structure 
S.......S

BTTTS

TTSB
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TT

TT

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   208.210. ........220......... 230...... ...240.........250.........260.........270....
 
   312.......320...... ...330...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . TEEDFQMLLDFLKEA. RLDRVGC
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Template Sequence  SPEAMKVHAAFEERVPRPVATVSTVADHLDHMREVAGVDHLGI
Template Known Secondary structure  SS




B
GGG
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   275....280.........290.........300.........310.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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