Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEI4
Confidence38.21%DateThu Jan 5 11:23:25 GMT 2012
Rank181Aligned Residues96
% Identity22%Templatec3hebB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:response regulator receiver domain protein (chey); PDBTitle: crystal structure of response regulator receiver domain from2 rhodospirillum rubrum
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30....... ..40..... ....50.........60.........70.... .
Predicted Secondary structure 



....






..................








..
Query SS confidence 

















. . . .







. . . . . . . . . . . . . . . . . .




























. .
Query Sequence  NLVDSERILTELRTEGYD. . . . VVPSYDDA. . . . . . . . . . . . . . . . . . DMVIVNTCGFIDSAVQESLEAIGEALNEN. . G
Query Conservation 
  

      
   
  ....       
..................







 
   
       
       .. 
Alig confidence 

















....







..................






.




















..
Template Conservation 
      
   
   
    
        

  
              





 . 

   
      

         
Template Sequence  DLGHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDL. NLPDXTGIDILKLVKENPHTRRSP
Template Known Secondary structure 
TT



SS
TT
SSGGGTT
B
S.B
SSSBSTTTTTS
Template Predicted Secondary structure 
















.











Template SS confidence 















































































   16...20.........30.........40.........50.........60.........70 .........80.........90....
 
   76...80.........90.........100.........110......
Predicted Secondary structure 












Query SS confidence 








































Query Sequence  KVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHY
Query Conservation   





 
    
       

 


      
   
   
Alig confidence 








































Template Conservation 

  
              
    
 

     
   
  
Template Sequence  VVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIRQL
Template Known Secondary structure  S


TT
S

SS
Template Predicted Secondary structure 












Template SS confidence 








































   95....100.........110.........120.........130.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions