Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEI4
Confidence23.46%DateThu Jan 5 11:23:25 GMT 2012
Rank258Aligned Residues102
% Identity14%Templatec3cz5B_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:two-component response regulator, luxr family; PDBTitle: crystal structure of two-component response regulator, luxr family,2 from aurantimonas sp. si85-9a1
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.... ..... 40..... ....50.........60.........70.........80......
Predicted Secondary structure 

.


...





.........















Query SS confidence 














.




. . .





. . . . . . . . .








































Query Sequence  NLVDSERILTELRTE. GYDVV. . . PSYDDA. . . . . . . . . DMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAK
Query Conservation 
  

      
   .
    ...     
.........







 
   
       
         





 
  
Alig confidence 














.




...





.........






.
































Template Conservation         
   
        
  
     
         



 
 . 
    
      

       

  
      
Template Sequence  HPIVREGYRRLIERRPGYAVVAEAADAGEAYRLYRETTPDIVVMDL. TLPGPGGIEATRHIRQWDGAARILIFTMHQGSA
Template Known Secondary structure 
TSTTSS

S
S.

SSS

TT

S

S
Template Predicted Secondary structure 













.


























Template SS confidence 















































































   14.....20.........30.........40.........50......... 60.........70.........80.........90..
 
   87..90.........100.........110.........120..
Predicted Secondary structure 











Query SS confidence 



































Query Sequence  EDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKH
Query Conservation    
       

 


      
   
         
Alig confidence 



































Template Conservation      
   
    
 

     
   
         
Template Sequence  FALKAFEAGASGYVTKSSDPAELVQAIEAILAGRRA
Template Known Secondary structure  T
STTS
TTTT

Template Predicted Secondary structure 











Template SS confidence 



































   93......100.........110.........120........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions