 |
Job Description | P0AEI4 | Confidence | 55.39% | Date | Thu Jan 5 11:23:25 GMT 2012 |
Rank | 114 | Aligned Residues | 114 |
% Identity | 11% | Template | c3cqkB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:l-ribulose-5-phosphate 3-epimerase ulae; |
PDBTitle: crystal structure of l-xylulose-5-phosphate 3-epimerase ulae (form b)2 complex with zn2+ and sulfate
|
Resolution | 2.33 Å |
|
 |
  |   |
245 | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
D | D | V | I | P | L | M | A | E | G | K | I | L | P | Y | L | D | I | P | L | Q | H | A | S | P | R | I | L | K | L | M | K | R | P | G | S | V | D | R | Q | L | A | R | I | K | Q | W | R | E | I | C | P | E | L | T | L | R | S | T | F | I | V | G | F | P | G | E | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|
|
|   |   |
|   |   |   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|
|
|   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|   |
|   |   |
|   |   |   |
| . |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |
|
|   |
|   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
L | E | R | L | Q | L | A | K | T | L | G | . |
F | D | F | V | E | M | S | V | D | E | T | D | E | R | L | S | R | L | . |
. |
. |
D | W | S | R | E | Q | R | L | A | L | V | N | A | I | V | E | T | . |
. |
G | V | R | V | P | S | . |
M | C | L | S | A | H | R | R | F | P | L | G | S | E | D | D | A | V | R | A | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | . |
| S |  |  |  |  |  |
|
| S | S |  |  |  |  | G | G | G | . | . | . | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
| B |
|
|  | . |  |  |  | G | G | G | G | T | S |
| T | T |
| S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | |
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
|
. | . | 70 | . | . | . | |
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
  |   |
|
313 | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 |
Predicted Secondary structure |   |
. |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
E | E | D | F | Q | M | L | L | D | F | L | K | E | A | R | L | D | R | V | G | C | F | K | Y | S | P | V | E | G | A | D | A | N | A | L | P | D | Q | V | P | E | E | V | K | E | E | R | W | N | R | F | M | Q | L | Q | Q | Q | I |
Query Conservation |   |
. |   |
|
|   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
G | L | E | I | M | R | K | A | I | Q | F | A | Q | D | V | G | I | R | V | I | Q | L | A | G | Y | D | V | Y | Y | Q | E | A | N | N | E | T | . |
. |
. |
. |
. |
R | R | R | F | R | D | G | L | K | E | S | V | E | M | A | S | R | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
|
| S |
| S | S | S |
|
|
|  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|