Job Description P0AEI4 Confidence 25.86% Date Thu Jan 5 11:23:25 GMT 2012
Rank 242 Aligned Residues 97
% Identity 14% Template c3cg0A_
PDB info
PDB header: lyaseChain: A: PDB Molecule: response regulator receiver modulated diguanylate cyclase
PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding
Resolution 2.15 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
20 . . . . . . . . . 30 . . . . . . . . . 40 . . . .
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Predicted Secondary structure  
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Query Sequence  
N L V D S E R I L T E L R T E G Y D V V P S Y D D .
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A D M V I V N T C G F I D S A V Q E S L E A I G E A L N E N G K V I V T G C L G A K E
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
G R L A A A T L R I Q L E S L G Y D V L G V F D N G E E A V R C A P D L R P D I A L V D I M L C G A L D G V E T A A R L A A .
G C N L P I I F I T S S Q D V E T
Template Known Secondary structure  
T S S S S S S S S . S
Template Predicted Secondary structure  
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Template SS confidence  
   
16 . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . .
. . 80 . . . . . . . . . 90 . . . .
 
   
88 . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
D Q I R E V H P K V L E I T G P H S Y E Q V L E H V H H Y V
Query Conservation  
                                           
Alig confidence  
Template Conservation  
                                             
Template Sequence  
F Q R A K R V N P F G Y L A K P V A A D T L H R S I E M A I
Template Known Secondary structure  
T T S S S
Template Predicted Secondary structure  
Template SS confidence  
   
95 . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]