Job Description P0AEI4 Confidence 65.56% Date Thu Jan 5 11:23:25 GMT 2012 Rank 78 Aligned Residues 137 % Identity 18% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	P	I	G	E	V	L	S	E	A	K	R	L	V	D	A	G	V	K	E	I	L	V	I	S	Q	D	T	S	A	Y	G	V	D	V	K	H	R	T	G	F	H	N	G	E	P	V	K	T	S	M	V	S	L	C	E	Q	L	S	K	L	G	I	W	T	R	L	H	Y	V	Y	P	Y	P	H	V	D	D	V
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		N	F	S	T	Q	D	K	V	E	I	A	K	A	L	D	E	F	G	I	E	Y	I	E	V	T	T	P	V	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	S	R	K	D	A	E	V	L	A	S	L	G	L	K	A	K	V	V	T	H	I	Q	C	.	.	R	L	D	A
Template Known Secondary structure																			T		S							G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S			S	S								S	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	L	M	A	E	G	K	I	L	P	Y	L	D	I	P	L	Q	H	A	S	P	R	I	L	K	L	M	K	R	P	G	S	V	D	R	Q	L	A	R	I	K	Q	W	R	E	I	C	P	E	L	T	L	R	S	T	F	I	V	G	F	P	G	E	T	E	E	D	F	Q	M	L	L	D	F	L	K	E	A	R
Query Conservation
Alig confidence										.																				.	.	.	.	.															.	.
Template Conservation										.																				.	.	.	.	.															.	.
Template Sequence		A	K	V	A	V	E	T	G	.	V	Q	G	I	D	L	L	F	G	T	S	K	G	R	D	I	P	R	I	.	.	.	.	.	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	.	.	A	P	H	V	E	V	R	F	S	A	E	D	T	F	R	S	E	E	Q	D	L	L	A	V	Y	E	A	V	A	P	Y
Template Known Secondary structure								T	T	.		S								S										.	.	.	.	.															.	.		T	T	S							S	S	T	T	T	S													G	G	G
Template Predicted Secondary structure										.																				.	.	.	.	.															.	.
Template SS confidence
		80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		328	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	R	V	G	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	R	V	G	L
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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