Job Description P0AEI4 Confidence 31.58% Date Thu Jan 5 11:23:25 GMT 2012 Rank 210 Aligned Residues 124 % Identity 20% Template c2zdsB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of sco6571 from streptomyces coelicolor2 a3(2) Resolution 2.30 Å

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		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	V	I	P	L	M	A	E	G	K	I	L	P	Y	L	D	I	P	L	Q	H	A	S	P	R	I	L	K	L	M	K	R	P	G	S	V	D	R	Q	L	A	R	I	K	Q	W	R	E	I	C	P	E	L	T	L	R	S	T	F	I	V	G	F	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																																				.	.	.	.	.							.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																																				.	.	.	.	.							.	.	.
Template Sequence		E	E	V	C	R	L	A	R	D	F	G	.	Y	D	G	L	E	L	A	C	W	G	D	H	F	E	V	D	K	A	L	A	D	P	S	Y	V	D	S	R	H	Q	L	L	D	K	Y	.	.	.	.	.	G	L	K	C	W	A	.	.	.	I	S	N	H	L	V	G	Q	A	V	C	D	A	I	I	D	E	R	H
Template Known Secondary structure												T	.		S						S	S	T	T	T										T	T												T	.	.	.	.	.	T		B		S		.	.	.													S	S		S
Template Predicted Secondary structure													.																																				.	.	.	.	.							.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
																					311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	E	E	D	F	Q	M	L	L	D	F	L	K	E	A	R	L	D	R	V	G	C	F	K	Y	S	P	V	E	G	A	D	A	N	A	L	P	D	Q	V	P	E	E	V	K	E	E	R	W	N	R	F	M	Q	L	Q	Q	Q	I	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Template Conservation																																																											.	.
Template Sequence		E	A	I	L	P	A	R	I	W	G	D	G	D	A	E	G	V	R	Q	R	A	A	A	E	I	K	D	T	A	R	A	A	A	R	L	G	V	D	T	V	I	G	F	T	G	S	A	I	W	H	L	V	A	X	F	P	P	.	.	A	P	E	S	X	I	E	R	G	Y	Q	D	F	A	D	R	W	N	P	I	L
Template Known Secondary structure					S						T	T																									T											S	S	G	G	G	T	T			S		.	.
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		372	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	R	L	Q	E	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	F	D	A	E	G	V
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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