Job Description P0AEI4 Confidence 34.57% Date Thu Jan 5 11:23:25 GMT 2012 Rank 198 Aligned Residues 139 % Identity 14% Template c2y0fD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27 Resolution 2.50 Å

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		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	I	G	E	V	L	S	E	A	K	R	L	V	D	A	G	V	K	E	I	L	V	I	S	Q	D	T	S	A	Y	G	V	D	V	K	H	R	T	G	F	H	N	G	E	P	V	K	T	S	M	V	S	L	C	E	Q	L	S	K	L	G	I	W	T	R	L	H	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	D	V	E	A	T	T	A	Q	V	L	E	L	H	R	A	G	S	E	I	V	R	L	T	V	N	D	E	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	A	V	P	E	I	K	R	R	L	L	A	E	G	V	E	V	P	L	V	G	D	F	H	F	N	G	H	L	L	L	R
Template Known Secondary structure		T															T	T		S								S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T											T	T										S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
														237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.													280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	Y	V	Y	P	Y	P	H	V	D	D	V	I	P	L	M	A	E	G	K	I	L	P	Y	L	D	I	P	L	Q	H	A	S	P	R	I	L	K	L	M	K	R	P	G	.	.	.	.	.	.	.	.	.	.	.	.	S	V	D	R	Q	L	A	R	I	K	Q	W	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.									.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		K	Y	P	K	M	A	E	A	L	D	K	F	R	I	N	P	E	H	F	A	.	E	M	I	R	I	A	M	D	L	G	K	P	V	R	I	G	A	N	W	G	S	L	D	P	A	L	L	T	E	L	M	D	R	N	A	S	R	P	E	P	K	S	A	H	E	V	V	L	E	A	L	V	E	S	A	V	R	A	Y
Template Known Secondary structure											S								T	T		.								T	T	T									G	G	G	S															S	S	S
Template Predicted Secondary structure																						.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		E	I	C	P	E	L	T	L	R	.	S	T	F	I	V	G	F	P	G	E	T	E	E	D	F	Q	M	L	L	D	F	L	K	E
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		E	A	A	L	E	M	G	L	G	E	D	K	L	V	L	S	A	K	V	S	K	A	R	D	L	V	W	V	Y	R	E	L	A	R
Template Known Secondary structure											G	G	G							B	S	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions