Job Description P0AEI4 Confidence 40.67% Date Thu Jan 5 11:23:25 GMT 2012 Rank 171 Aligned Residues 145 % Identity 16% Template c2pjuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr Resolution 2.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		Q	P	K	I	G	F	V	S	L	G	C	P	K	N	L	V	D	S	E	R	I	L	T	E	L	R	T	E	G	Y	D	V	V	P	S	Y	D	D	A	D	M	V	I	V	N	T	C	G	F	I	D	S	A	V	Q	E	S	L	E	A	I	G	E	A	L	N	E	N	G	.	.	K	V	I	V	T	G	C	L	G
Query Conservation																																																																							.	.
Alig confidence												.	.	.	.	.	.	.	.	.									.	.	.																	.			.	.	.	.	.																.	.							.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.									.	.	.																	.			.	.	.	.	.																								.	.	.
Template Sequence		K	P	V	I	W	T	V	S	V	T	.	.	.	.	.	.	.	.	.	R	L	F	E	L	F	R	D	.	.	.	I	S	L	E	F	D	H	L	A	N	I	T	P	I	Q	L	.	G	F	.	.	.	.	.	E	K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	.	.	.
Template Known Secondary structure										S	S	.	.	.	.	.	.	.	.	.	T								.	.	.			T	T	T	T	T	T	S								.			.	.	.	.	.												T	T				S							.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.									.	.	.																	.			.	.	.	.	.																								.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20										.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	E	D	Q	I	R	E	V	H	P	K	V	L	E	I	T	G	P	H	S	Y	E	Q	V	L	E	H	V	H	H	Y	V	P	K	P	K	H	N	P	F	L	S	L	V	P	E	Q	G	V	K	L	T	P	R	H	Y	A	Y	L	K	I	S	E	G	C	N	H	R	C	T	F	C	I	I	P	S	M	R	G
Query Conservation
Alig confidence		.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation		.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		.	S	N	G	A	Y	L	K	S	R	L	S	V	P	V	I	L	I	K	P	S	G	Y	D	V	L	Q	F	L	A	K	A	G	K	L	T	S	S	I	G	V	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	E	T	I	P	A	L	V	A	F	Q	K	T	F	N	L	R	L	D	Q	.
Template Known Secondary structure		.								T	T		S	S																			T	T		T	T	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S													T						.
Template Predicted Secondary structure		.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	V	S	R	P	I	G	E	V	L	S	E	A	K	R	L	V	D	A	G	V	K	E	I	L
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	R	S	Y	I	T	E	E	D	A	R	G	Q	I	N	E	L	K	A	N	G	T	E	A	V	V
Template Known Secondary structure		.				S	S														T	T
Template Predicted Secondary structure		.
Template SS confidence
			133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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