Job Description P0AEI4 Confidence 88.35% Date Thu Jan 5 11:23:25 GMT 2012 Rank 38 Aligned Residues 148 % Identity 11% Template c2cw6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:hydroxymethylglutaryl-coa lyase, mitochondrial; PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria Resolution 2.10 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	P	I	G	E	V	L	S	E	A	K	R	L	V	D	A	G	V	K	E	I	L	V	I	S	Q	D	T	S	A	Y	G	V	D	V	K	H	R	T	G	F	H	N	G	E	P	V	K	T	S	M	V	S	L	C	E	Q	L	S	K	L	G	I	W	T	R	L	H	Y	V	Y	P	Y	P	H	V	D	D	V
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Sequence		I	V	S	T	P	V	K	I	K	L	I	D	M	L	S	E	A	G	L	S	V	I	E	T	T	S	F	V	S	P	K	W	V	P	Q	M	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T	E	V	L	K	G	I	Q	K	F	P	G	I	N	Y	P	V	L	T	P	.	.	.	.	N	L	K	G
Template Known Secondary structure																		T	T		S										T	T	T		G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.								S				T	T		B							.	.	.	.	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.														.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.				.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																		.	.																																	.	.	.
Query SS confidence																																		.	.																																	.	.	.
Query Sequence		I	P	L	M	A	E	G	K	I	L	P	Y	L	D	I	P	L	Q	H	A	S	P	R	I	L	K	L	M	K	R	P	G	.	.	S	V	D	R	Q	L	A	R	I	K	Q	W	R	E	I	C	P	E	L	T	L	R	S	T	F	I	V	G	F	P	G	E	.	.	.	T	E	E	D	F	Q	M	L	L	D	F
Query Conservation																																		.	.																																	.	.	.
Alig confidence											.																							.	.																																	.	.	.
Template Conservation											.
Template Sequence		F	E	A	A	V	A	A	G	A	.	K	E	V	V	I	F	G	A	A	S	E	L	F	T	K	K	N	I	N	C	S	I	E	E	S	F	Q	R	F	D	A	I	L	K	A	A	Q	S	A	N	I	S	V	R	G	Y	V	S	C	A	L	G	C	P	Y	E	G	K	I	S	P	A	K	V	A	E	V	T	K	K
Template Known Secondary structure								T	T		.	S								S									T	S	S		T	T	T															T	T									S	T	T		B	T	T	T	B	S
Template Predicted Secondary structure											.
Template SS confidence
		113	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		323	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	E	A	R	L	D	R	V	G	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Y	S	M	G	C	Y	E	I	S	L
Template Known Secondary structure					T	T		S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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