Job Description P0AEI4 Confidence 43.91% Date Thu Jan 5 11:23:25 GMT 2012 Rank 155 Aligned Residues 112 % Identity 12% Template c1ys7B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulatory protein prra; PDBTitle: crystal structure of the response regulator protein prra comlexed with2 mg2+ Resolution 1.58 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																															.	.										.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.										.	.	.	.	.	.	.	.	.
Query Sequence		P	K	I	G	F	V	S	L	G	C	P	K	N	L	V	D	S	E	R	I	L	T	E	L	R	T	E	G	Y	.	.	D	V	V	P	S	Y	D	D	A	.	.	.	.	.	.	.	.	.	D	M	V	I	V	N	T	C	G	F	I	D	S	A	V	Q	E	S	L	E	A	I	G	E	A	L	N	E	N	G	K
Query Conservation																															.	.										.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.																				.	.										.	.	.	.	.	.	.	.	.																	.
Template Conservation								.	.	.	.																																																								.
Template Sequence		P	R	V	L	V	V	.	.	.	.	D	D	D	S	D	V	L	A	S	L	E	R	G	L	R	L	S	G	F	E	V	A	T	A	V	D	G	A	E	A	L	R	S	A	T	E	N	R	P	D	A	I	V	L	D	I	N	M	P	V	L	D	G	V	S	.	V	V	T	A	L	R	A	M	D	N	D	V	P	V
Template Known Secondary structure								.	.	.	.		S															T	T							S	S											S			S						S	S		S	S	S					.								T	T
Template Predicted Secondary structure								.	.	.	.																																																								.
Template SS confidence
		8	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	V	T	G	C	L	G	A	K	E	D	Q	I	R	E	V	H	P	K	V	L	E	I	T	G	P	H	S	Y	E	Q	V	L	E	H	V	H	H	Y	V	P	K	P	K	H	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	V	L	S	A	R	S	S	V	D	D	R	V	A	G	L	E	A	G	A	D	D	Y	L	V	K	P	F	V	L	A	E	L	V	A	R	V	K	A	L	L	R	R	R	G	S	T	A
Template Known Secondary structure							T	T												T								S																T	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions