Job Description P0AEI4 Confidence 57.88% Date Thu Jan 5 11:23:25 GMT 2012 Rank 106 Aligned Residues 145 % Identity 14% Template c1ydoC_ PDB info PDB header:lyase Chain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181. Resolution 2.71 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	P	I	G	E	V	L	S	E	A	K	R	L	V	D	A	G	V	K	E	I	L	V	I	S	Q	D	T	S	A	Y	G	V	D	V	K	H	R	T	G	F	H	N	G	E	P	V	K	T	S	M	V	S	L	C	E	Q	L	S	K	L	G	I	W	T	R	L	H	Y	V	Y	P	Y	P	H	V	D	D	V
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Sequence		W	I	A	T	E	D	K	I	T	W	I	N	Q	L	S	R	T	G	L	S	Y	I	E	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	V	H	P	K	W	I	P	A	L	R	D	A	I	D	V	A	K	G	I	D	R	E	K	G	V	T	Y	A	A	L	V	.	.	.	.	P	N	Q	R	G
Template Known Secondary structure																	T	T	T		S						.	.	.	.	.	.	.	.	.	.	.	.	.			S		T	T	T		G	G	G	T	T								S				T	T								.	.	.	.		S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.														.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310							.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.																																.	.	.	.	.	.
Query SS confidence																																		.	.																																.	.	.	.	.	.
Query Sequence		I	P	L	M	A	E	G	K	I	L	P	Y	L	D	I	P	L	Q	H	A	S	P	R	I	L	K	L	M	K	R	P	G	.	.	S	V	D	R	Q	L	A	R	I	K	Q	W	R	E	I	C	P	E	L	T	L	R	S	T	F	I	V	G	F	P	G	.	.	.	.	.	.	E	T	E	E	D	F	Q	M	L
Query Conservation																																		.	.																																.	.	.	.	.	.
Alig confidence										.																								.	.																.	.													.		.	.	.	.	.	.
Template Conservation										.																																									.	.													.
Template Sequence		L	E	N	A	L	E	G	G	.	I	N	E	A	C	V	F	X	S	A	S	E	T	H	N	R	K	N	I	N	K	S	T	S	E	S	L	H	I	L	K	Q	V	N	N	D	A	Q	K	A	.	.	N	L	T	T	R	A	Y	L	S	T	V	F	.	G	C	P	Y	E	K	D	V	P	I	E	Q	V	I	R	L
Template Known Secondary structure									T	.		S								S	S						T	T	T		S																			T	.	.	T										T	T	.		B	T	T	T	B
Template Predicted Secondary structure										.																																									.	.													.
Template SS confidence
		87	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	F	L	K	E	A	R	L	D	R	V	G	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	A	L	F	E	F	G	I	S	E	L	S	L
Template Known Secondary structure									T		S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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