 |
Job Description | P0AEI4 | Confidence | 67.32% | Date | Thu Jan 5 11:23:25 GMT 2012 |
Rank | 73 | Aligned Residues | 66 |
% Identity | 21% | Template | c1x7fA_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:outer surface protein; |
PDBTitle: crystal structure of an uncharacterized b. cereus protein
|
Resolution | 2.30 Å |
|
 |
  |   |
244 | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | D | D | V | I | P | L | M | A | E | G | K | I | L | P | Y | L | D | I | P | L | Q | H | A | S | P | R | I | L | K | L | M | K | R | P | G | S | V | D | R | Q | L | A | R | I | K | Q | W | R | E | I | C | P | E | L | T | L | R | S | T | F | I | V | G | F | P | G | E | T | E | E | D | F | Q | M | L | L | D | F | L |
Query Conservation |   |
  |   |
|
|
|   |   |
|   |   |   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|
|
|   |
|
|
|
|   |
|
|   |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|   |   |   |
| . |
|   |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   | . | . |   |   |   |
|
|   |
|
| . | . | . | . | . | . | . |
|
|   |   |
|   |   |
|
|   |   |
|
Template Sequence |   |
D | M | A | Y | I | S | A | A | A | R | H | G | . |
F | S | R | I | F | T | C | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | S | V | A | E | F | K | E | I | I | N | H | A | K | D | N | . |
. |
N | M | E | V | I | L | D | V | . |
. |
. |
. |
. |
. |
. |
A | P | A | V | F | Y | S | D | L | S | F | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | T | . |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | T |
|  |  |  |  |  |  | . | . | . | . | . | . | . |
| T | T |
|
|
|
|
| T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | |
. | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
. | . | . | . | . | 60 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . |
  |
  |   |
324 | . | . | . | . | . | 330 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | E | A | R | L | D | R | V | G | C |
Query Conservation |   |
  |   |
|   |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |   |
|
|
|
Template Sequence |   |
A | E | L | G | A | D | G | I | R | L |
Template Known Secondary structure |   |
 |  |  | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|