Job Description P0AEI4 Confidence 45.54% Date Thu Jan 5 11:23:25 GMT 2012 Rank 150 Aligned Residues 74 % Identity 22% Template c1l2fA_ PDB info PDB header:transcription Chain: A: PDB Molecule:n utilization substance protein a; PDBTitle: crystal structure of nusa from thermotoga maritima: a2 structure-based role of the n-terminal domain Resolution 2.50 Å

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		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.				.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		K	E	E	R	W	N	R	F	M	Q	L	Q	Q	Q	I	S	A	E	R	L	Q	E	K	V	G	R	E	I	L	V	I	I	D	E	V	D	E	E	G	A	.	.	.	I	G	R	S	M	A	D	A	P	E	I	D	G	A	V	Y	L	N	G	E	T	N	V	K	P	G	D	I	L	R	V	K	V	E	H	A	D
Query Conservation																																										.	.	.
Alig confidence																																										.	.	.															.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		K	Q	V	L	I	Q	R	I	R	E	L	E	K	E	K	Q	F	E	K	Y	S	E	L	K	G	T	V	T	T	A	E	V	I	R	V	X	G	E	W	A	D	I	R	I	G	K	L	E	T	R	L	P	K	K	E	W	I	.	.	.	.	P	G	E	E	I	K	A	G	D	L	V	K	V	Y	I	I	D	V	V
Template Known Secondary structure																							T	T	T	T	S											S	S							T	T							G	G	G	S		.	.	.	.	T	T					T	T
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		433
Predicted Secondary structure
Query SS confidence
Query Sequence		E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		187

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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