Return to main results Retrieve Phyre Job Id

Job DescriptionP39387
Confidence76.56%DateThu Jan 5 12:00:19 GMT 2012
Rank4Aligned Residues47
% Identity19%Templated1trra_
SCOP infoDNA/RNA-binding 3-helical bundle TrpR-like Trp repressor, TrpR
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   259260.........270.........280.........290...... ...300.....
Predicted Secondary structure 






..
Query SS confidence 





































. .








Query Sequence  GEQRILRLLLQNGADPEWIQKITGLSAEQMQALRQPLP. . ERERYSWLK
Query Conservation 
  
    

  
 
 
 

    

 
 
  

  
 ..         
Alig confidence 





































..








Template Conservation   
  
   

 
  




   



 






  

      
  
 
Template Sequence  TRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLE
Template Known Secondary structure 

S
T

S
Template Predicted Secondary structure 








Template SS confidence 
















































   53......60.........70.........80.........90.........100.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions