Return to main results Retrieve Phyre Job Id

Job DescriptionP39387
Confidence35.58%DateThu Jan 5 12:00:19 GMT 2012
Rank35Aligned Residues46
% Identity22%Templatec3d6zA_
PDB info PDB header:transcription regulator/dnaChain: A: PDB Molecule:multidrug-efflux transporter 1 regulator; PDBTitle: crystal structure of r275e mutant of bmrr bound to dna and rhodamine
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280.........290....... ..300.....
Predicted Secondary structure 






..
Query SS confidence 





































. .







Query Sequence  EQRILRLLLQNGADPEWIQKITGLSAEQMQALRQPLPE. . RERYSWLK
Query Conservation    
    

  
 
 
 

    

 
 
  

  
  ..        
Alig confidence 





































..







Template Conservation   
  
  

 

 

 


  
          
      
   
  
 
Template Sequence  HLDLIKSLKYIGTPLEEMKKAQDLEMEELFAFYTEQERQIREKLDFLS
Template Known Secondary structure  TT

S
SS
Template Predicted Secondary structure 





Template SS confidence 















































   52.......60.........70.........80.........90.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions