 |
| Job Description | P39387 | | Confidence | 25.09% | Date | Thu Jan 5 12:00:19 GMT 2012 |
| Rank | 57 | Aligned Residues | 25 |
| % Identity | 24% | Template | c2k9lA_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:rna polymerase sigma factor rpon; |
PDBTitle: structure of the core binding domain of sigma54
|
| Resolution | UNK |
|
| | |
271 | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
| Predicted Secondary structure | |
|
|
|  | | | | | | | |
|
|
| | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
G | A | D | P | E | W | I | Q | K | I | T | G | L | S | A | E | Q | M | Q | A | L | R | Q | P | L |
| Query Conservation | |
| |
| |
| |
|
| | | | |
|
| |
| |
| | |
|
| | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | |
|
|
| | |
| | | | | | |
|
| |
|
| | |
|
| Template Sequence | |
S | K | S | V | E | E | I | S | D | V | L | R | C | S | V | E | E | L | E | K | V | R | Q | K | V |
| Template Known Secondary structure | |
|
|
| | | | | | | | | T | S |
| | | | | | | | | | | |
| Template Predicted Secondary structure | |
|
|
| | | | | | | |
|
|
|
| | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
