Job Description P77504 Confidence 43.44% Date Thu Jan 5 12:30:05 GMT 2012 Rank 15 Aligned Residues 230 % Identity 14% Template c3k07A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:cation efflux system protein cusa; PDBTitle: crystal structure of cusa Resolution 3.52 Å

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		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	L	D	G	Y	E	K	W	L	L	P	Q	L	K	P	E	Q	R	W	Y	G	L	E	Q	D	E	G	A	L	G	R	S	M	E	R	S	Q	Q	F	L	L	L	S	A	L	L	T	L	L	L	A	V	A	A	V	A	V	A	M	N	H	Y	C	R	S	R	Y	D	L	V	A	I	L	K	T	L	G	A	G
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	V	K	D	K	L	E	T	L	K	S	S	L	P	E	G	V	E	I	V	T	T	Y	D	R	S	Q	L	I	D	R	A	I	D	N	L	S	G	K	L	L	E	E	F	I	V	V	A	V	V	C	A	L	F	L	W	H	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												G	G	G	S		T	T									T																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		R	A	Q	L	R	K	L	I	V	G	Q	W	L	M	V	L	T	L	S	A	V	T	G	G	A	I	G	L	L	F	E	N	V	L	M	V	L	L	K	P	V	L	P	A	A	L	P	P	A	S	L	W	P	W	L	W	A	L	G	T	M	T	V	I	S	L	L	V	G	L	R	P	Y	R	L	L	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.																																				.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	S	A	L	V	A	I	I	S	L	P	L	G	L	C	I	A	F	I	V	M	H	F	Q	.	.	.	.	.	.	.	.	G	L	N	A	N	I	M	S	L	G	G	I	A	I	A	V	G	A	M	V	D	A	A	I	V	M	I	E	N	A	H	K	R	L	E	E	W	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.							T																	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template SS confidence
													362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.									.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
											361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	A	T	Q	P	L	R	V	L	R	N	D	V	V	A	N	V	W	P	L	K	F	Y	L	P	I	V	S	V	V	V	V	L	L	L	A	G	L	M	G	G	S	M	L	L	W	A	V	L	A	G	A	V	V	L	A	L	L	C	G	V	L	G	W	M	L	L	N	V	L	R	R
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	Q	H	P	D	A	T	L	D	N	K	T	R	W	Q	V	I	T	D	A	S	V	E	V	G	P	A	L	F	I	S	L	L	I	I	T	L	S	F	I	P	I	F	T	L	E	G	Q	E	G	R	L	F	G	P	L	A	F	T	K	T	Y	A	M	A	G	A	A	L	L	A	I	V	V	I	P	I	L	M	G
Template Known Secondary structure				S		S	S																		S																G	G	G	G	G																														T
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	L	K	S	L	P	L	R	L	A	V	S	R	L	L	R	Q	P	W	S	T	L	S	Q	L	S	A	F	S	L	S	F	M	L	L	A	L	L	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	W	P	L	N	R	F	L	I	R	V	Y	H	P	L	L	L	K	V	L	H	W	P	K	T	T	L	L	V	A	A	L	S	V	L	T	V	L	W	P	L
Template Known Secondary structure																																					T	T
Template Predicted Secondary structure
Template SS confidence
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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