Job Description P77504 Confidence 37.72% Date Thu Jan 5 12:30:05 GMT 2012 Rank 18 Aligned Residues 230 % Identity 12% Template c1oy8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump Resolution 3.63 Å

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	L	L	P	Q	L	K	P	E	Q	R	W	Y	G	L	E	Q	D	E	G	A	L	G	R	S	M	E	R	S	Q	Q	F	L	L	L	S	A	L	L	T	L	L	L	A	V	A	A	V	A	V	A	M	N	H	Y	C	R	S	R	Y	D	L	V	A	I	L	K	T	L	G	A	G	R	A	Q	L	R	K	L
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	M	E	P	F	F	P	S	G	L	K	I	V	Y	P	Y	D	T	T	P	F	V	K	I	S	I	H	E	V	V	K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T	S	S	S			S	S							S	B	S																																	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	G	Q	W	L	M	V	L	T	L	S	A	V	T	G	G	A	I	G	L	L	F	E	N	V	L	M	V	L	L	K	P	V	L	P	A	A	L	P	P	A	S	L	W	P	W	L	W	A	L	G	T	M	T	V	I	S	L	L	V	G	L	R	P	Y	R	L	L	L	A	T	Q	P	L	R	V	L	R	N
Query Conservation
Alig confidence		.	.	.	.																								.	.	.	.	.	.
Template Conservation		.	.	.	.																								.	.	.	.	.	.
Template Sequence		.	.	.	.	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	.	.	.	.	.	.	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E	N	V	E	R	V	M	A	E	E	G	L	P	P	K	E	A	T	R	K
Template Known Secondary structure		.	.	.	.	T	T	T	T	T	T	T	T																.	.	.	.	.	.	T			S																																	T				S
Template Predicted Secondary structure		.	.	.	.																								.	.	.	.	.	.
Template SS confidence
						364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.							.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	V	A	N	V	W	P	L	K	F	Y	L	P	I	V	S	V	V	V	V	L	L	L	A	G	L	M	G	G	S	M	L	L	W	A	V	L	A	G	A	V	V	L	A	L	L	C	G	V	L	G	W	M	L	L	N	V	L	R	R	M	T	L	K	S	L	P	L	R	L	A	V	S	R	L	L	R	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V	P	M	A	F	F	G	G	S	T	G	A	I	Y	R	Q	F	S	I	T	I	V	S	A	M	A	L	S	V	L	V	A	L	I	L	T	P	A	L	C	A	T	M	L	K	F	G	W	F	N	R	M	F	E	K	S	T	H	H	Y
Template Known Secondary structure		T																T	T	T	S	T	T	T	T				G	G	G																						T	T	T									S															T
Template Predicted Secondary structure
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	T	L	S	Q	L	S	A	F	S	L	S	F	M	L	L	A	L	L	L	V	L	R	G	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	S	V	G	G	I	L	R	S	T	G	R	Y	L	V	L	Y	L	I	I	V	V	G	M	A	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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