Phyre 2 alignment of P0A6A0 with d1vjya

Job Description P0A6A0
Confidence 99.55% Date Thu Jan 5 11:02:40 GMT 2012

Rank 215 Aligned Residues 265

% Identity 11% Template d1vjya_

SCOP info Protein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit

Resolution 2.00

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	P	L	A	S	A	S	I	A	Q	V	H	T	A	R	L	K	S	N	G	K	E	V	V	I	K	V	I	R	P	D	I	L	P	V	I	K	A	D	L	K	L	I	Y	R	L	A	R	W	V	P	R	L	L	P	D	G	R	R	L	R	P	T	E	V	V	R	E	Y	E	K	T	L	I	D	E	L	N	L	L
Query Conservation
Alig confidence																		.	.																	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	E	S	I	G	K	G	R	F	G	E	V	W	R	G	K	W	R	.	.	G	E	E	V	A	V	K	I	F	S	S	R	E	E	R	S	.	.	.	.	.	.	.	.	.	.	.	.	W	F	R	E	A	E	I	Y	Q	T	V	M	L	R	H	E	N	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S	S								T	.	.	T										G	G	G				.	.	.	.	.	.	.	.	.	.	.	.									T	S	T	T				T	T	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.																	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.													.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

	208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.
Query Sequence	R	E	S	A	N	A	I	Q	L	R	R	N	F	E	D	S	P	M	L	Y	I	P	E	V	Y	P	D	Y	C	S	E	G	M	M	V	M	E	R	I	Y	G	I	P	V	S	D	V	A	A	L	E	K	N	G	T	N	M	K	L	L	A	E	R	G	V	Q	V	F	F	T	Q	V	F	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.
Template Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	I	A	A	D	N	K	D	N	G	T	W	T	Q	L	W	L	V	S	D	Y	H	E	H	G	S	L	F	D	Y	L	N	R	Y	T	V	T	V	E	G	M	I	K	L	A	L	S	T	A	S	G	L	A	H	L	H	M	E	I	V	G	T	Q
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S	S											T	T		B										B																							B		S	T	T
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure	.
Query SS confidence	.
Query Sequence	.	R	D	S	F	F	H	A	D	M	H	P	G	N	I	F	V	S	Y	E	H	P	E	N	P	K	Y	I	G	I	D	C	G	I	V	G	S	L	N	K	E	D	K	R	Y	L	A	E	N	F	I	A	F	F	N	R	D	Y	R	K	V	A	E	L	H	V	D	S	G	W	V	P	P	D	T	N	V	E	E	F
Query Conservation	.
Alig confidence	.																		.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence	G	K	P	A	I	A	H	R	D	L	K	S	K	N	I	L	V	K	.	.	.	.	K	N	G	T	C	C	I	A	D	L	G	L	A	V	R	H	D	S	A	T	D	T	I	D	I	R	V	G	T	K	R	Y	M	A	P	E	V	L	D	D	S	I	N	M	K	H	F	E	S	F	K	R	A	D	I	Y	A	M
Template Known Secondary structure		B						S				G	G	G					.	.	.	.	T	T	S								T	T						T	T	T	T							S		G	G	G							T	T		S		T	T
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
	325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.														.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Query Sequence	E	F	A	I	R	T	V	C	E	P	I	F	E	K	P	L	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	F	G	H	V	L	L	N	L	F	N	T	A	R	R	F	N	M	E	V	Q	P	Q	L	V	L	L	Q	K	T	L	L	Y	V	E	G	V	G	R	Q	L	Y	P	Q	L	D	L	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Template Conservation
Template Sequence	G	L	V	F	W	E	I	A	R	R	C	S	I	G	G	I	H	E	D	Y	Q	L	P	Y	Y	D	L	V	P	S	D	P	S	V	E	E	M	R	K	V	V	C	E	Q	K	L	R	P	N	I	P	N	R	W	Q	S	C	E	A	L	R	V	M	A	K	I	M	R	E	C	W	Y	A	N	G	A	A	R	L	T
Template Known Secondary structure										T	B		B	T	T	B							T	T	T	T	T	S		S	S											T	T	S								G	G	G	G	G													T	T			S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
	405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.

	426	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure
Query SS confidence
Query Sequence	W	K	T	A	K	P	F	L	E	S	W	I	K	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence	A	L	R	I	K	K	T	L	S	Q	L	S	Q	Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
	485	.	.	.	.	490	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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