Job Description P0A6A0 Confidence 99.89% Date Thu Jan 5 11:02:40 GMT 2012 Rank 24 Aligned Residues 248 % Identity 15% Template c3zzwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:tyrosine-protein kinase transmembrane receptor ror2; PDBTitle: crystal structure of the kinase domain of ror2 Resolution 2.90 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		L	A	S	A	S	I	A	Q	V	H	T	A	R	L	K	S	.	.	.	.	.	N	G	K	E	V	V	I	K	V	I	R	P	D	I	L	P	V	I	K	A	D	L	K	L	I	Y	R	L	A	R	W	V	P	R	L	L	P	D	G	R	R	L	R	P	T	E	V	V	R	E	Y	E	K	T	L	I	D	E	L
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Sequence		L	G	E	D	R	F	G	K	V	Y	K	G	H	L	F	G	P	A	P	G	E	Q	T	Q	A	V	A	I	K	T	L	K	D	K	A	E	G	P	.	.	.	.	.	.	.	.	.	.	L	R	E	E	F	R	H	E	A	M	L	R	A	R	L	Q	H	P	N	V	V	C	L	L	G	.	.	.	.	.	.	.
Template Known Secondary structure						S	S	S										S	S	T	T	S												T	T					.	.	.	.	.	.	.	.	.	.																		T	T	B						.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.											.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		N	L	L	R	E	S	A	N	A	I	Q	L	R	R	N	F	E	D	S	P	M	L	Y	I	P	E	V	Y	P	D	Y	C	S	E	G	M	M	V	M	E	R	I	Y	G	I	P	V	S	D	V	A	A	L	E	K	N	G	T	N	M	K	L	L	A	E	R	G	.	V	Q	V	F	F	T	Q	V	F	R	D	S
Query Conservation																																																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	T	K	D	Q	P	L	S	M	I	F	S	Y	C	S	H	G	D	L	H	E	F	L	V	M	R	S	A	L	E	P	P	D	F	V	H	L	V	A	Q	I	A	A	G	M	E	Y	L	S	S	H	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	S	S									S	S		B																																	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																													542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	H	A	D	M	H	P	G	N	I	F	V	S	Y	E	H	P	E	N	P	K	Y	I	G	I	D	C	G	I	V	G	S	L	N	K	E	D	K	R	Y	L	A	E	N	F	I	A	F	F	N	R	D	Y	R	K	V	A	E	L	H	V	D	S	G	W	V	P	P	D	T	N	V	E	E	F	E	F	A	I
Query Conservation
Alig confidence																.	.	.	.																										.	.	.	.
Template Conservation																.	.	.	.																										.	.	.	.
Template Sequence		V	V	H	K	D	L	A	T	R	N	V	L	V	Y	.	.	.	.	D	K	L	N	V	K	I	S	D	L	G	L	F	R	E	V	Y	A	A	D	Y	Y	K	L	L	.	.	.	.	G	N	S	L	L	P	I	R	W	M	A	P	E	A	I	M	Y	G	K	F	S	I	D	S	D	I	W	S	Y	G	V	V	L
Template Known Secondary structure					S			S	G	G	G					.	.	.	.	G	G	G											T	T	T	S	G	G	G	S				T	.	.	.	.	T	T					G	G	G												S
Template Predicted Secondary structure																.	.	.	.																										.	.	.	.
Template SS confidence
		611	.	.	.	.	.	.	.	.	620	.	.	.	.					.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.					650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		R	T	V	C	E	P	I	F	E	K	P	L	A	E	I	S	F	G	H	V	L	L	N	L	F	N	T	A	R	R	F	N	M	E	V	Q	P	Q	L	V	L	L	Q	K	T	L	L	Y	V	E	G	V	G	R	Q	L	Y	P	Q	L	D	L	.	W	K	T	A	K	P	F	L	E	S	W
Query Conservation																																																																.
Alig confidence								.																				.	.	.																					.	.	.											.
Template Conservation								.																				.	.	.																					.	.	.
Template Sequence		W	E	V	F	S	Y	.	G	L	Q	P	Y	C	G	Y	S	N	Q	D	V	V	E	M	I	R	N	.	.	.	R	Q	V	L	P	C	P	D	D	C	P	A	W	V	Y	A	L	M	I	E	.	.	.	C	W	N	E	F	P	S	R	R	P	R	F	K	D	I	H	S	R	L	R	A	W
Template Known Secondary structure						T	T	.	T			T	T	T	T	S											T	.	.	.	T							T	T												.	.	.		T		S	S	G	G	G	S												T	T
Template Predicted Secondary structure								.																				.	.	.																					.	.	.
Template SS confidence
		683	.	.	.	.	.		.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.				.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.				.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions