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Job DescriptionP0A6A0
Confidence99.89%DateThu Jan 5 11:02:40 GMT 2012
Rank20Aligned Residues240
% Identity12%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170.........180.........190.........200.......
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Query Sequence  KPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLL
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Template Sequence  EELGKGSVVRRCVKV. . LAGQEYAAMIINTKKLS. . . . . . . . . ARDHQKLEREARICRLLKHPNIVRLHD. . . . . . . . . .
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T..TTTS
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BTTB

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   17..20.........30. ........40........ .50.........60.........70.....
 
   208.210.........220.........230.........240.........250.........260.........270.... .....280.....
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Query Sequence  RESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQV. . FFTQVFRDSFF
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . SISEEGHHYLIFDLVTGGELFEDIV. AREYYSEADASHCIQQILEAVLHCHQMGVV
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B

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   78.80.........90.........100.. .......110.........120.........130..
 
   286...290.........300.........310.........320.........330.........340.........350.........360.....
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Query Sequence  HADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRT
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Template Sequence  HRNLKPENLLLASKL. KGAAVKLADFGLAIEVEGEQQAWFGFA. . . . . . GTPGYLSPEVLRKDPYGKPVDLWACGVILYI
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SSTTSBSS.TT




SS
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   133......140....... ..150.........160.........170.... .....180.........190.........200.....
 
   366...370.........380.........390.........400.........410.........420.....
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Query Sequence  VCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDL
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Template Sequence  LLVGYPPF. . WDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK. . . MLTINPSKRI
Template Known Secondary structure  SS
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SST




TTTTTTS
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   206...210... ......220.........230.........240.........250 .........260
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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