Job Description P0A6A0 Confidence 99.73% Date Thu Jan 5 11:02:40 GMT 2012 Rank 150 Aligned Residues 242 % Identity 14% Template c3qd2B_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crsytal structure of mouse perk kinase domain Resolution 2.81 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	L	A	S	A	S	I	A	Q	V	H	T	A	R	L	K	S	N	G	K	E	V	V	I	K	V	I	R	P	D	I	L	P	V	I	K	A	D	L	K	L	I	Y	R	L	A	R	W	V	P	R	L	L	P	D	G	R	R	L	R	P	T	E	V	V	R	E	Y	E	K	T	L	I	D	E	L	N	L	L
Query Conservation
Alig confidence								.																													.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation								.																													.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	C	M	G	R	G	.	F	G	V	V	F	E	A	K	N	K	V	D	D	C	N	Y	A	I	K	R	I	R	L	P	N	R	E	L	.	.	.	.	.	.	.	.	.	.	A	R	E	K	V	M	R	E	V	K	A	L	A	K	L	E	H	P	G	I	V	R	Y	F	N	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								.		S								T	T	T													S	T	T	T	.	.	.	.	.	.	.	.	.	.													T	S				T	T	B						.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.																													.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		593	.	.	.	.	.		.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.											.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																																						.	.																.	.
Query SS confidence																																																						.	.																.	.
Query Sequence		R	E	S	A	N	A	I	Q	L	R	R	N	F	E	D	S	P	M	L	Y	I	P	E	V	Y	P	D	Y	C	S	E	G	M	M	V	M	E	R	I	Y	G	I	P	V	S	D	V	A	A	L	E	K	.	.	N	G	T	N	M	K	L	L	A	E	R	G	V	Q	V	.	.	F	F	T	Q	V	F	R	D	S
Query Conservation																																																						.	.																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																										.	.																.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	A	W	L	E	T	P	P	E	K	W	Q	E	E	M	D	E	P	K	V	Y	L	Y	I	Q	M	Q	L	C	R	K	E	N	L	K	D	W	M	N	R	R	C	S	L	E	D	R	E	H	G	V	C	L	H	I	F	I	Q	I	A	E	A	V	E	F	L	H	S	K	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.							S																							S	S								T			S	G	G	G	S																						T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													653	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	H	A	D	M	H	P	G	N	I	F	V	S	Y	E	H	P	E	N	P	K	Y	I	G	I	D	C	G	I	V	G	S	L	N	K	E	D	K	R	Y	L	A	E	N	F	I	A	F	F	N	R	D	Y	R	K	V	A	E	L	H	V	D	S	G	W	V	P	P	D	T	N	V	E	E	F	E	F	A	I
Query Conservation
Alig confidence																.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	H	R	D	L	K	P	S	N	I	F	F	T	.	.	.	.	M	D	D	V	V	K	V	G	D	F	G	L	V	T	A	M	D	Q	D	.	.	.	.	.	.	.	.	.	.	T	H	G	Q	V	T	K	L	Y	M	S	P	E	Q	I	H	G	N	N	Y	S	H	K	V	D	I	F	S	L	G	L	I	L
Template Known Secondary structure									G	G	G					.	.	.	.	T	T									T	T					S			.	.	.	.	.	.	.	.	.	.							G	G	G	S												T
Template Predicted Secondary structure																.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		931	.	.	.	.	.	.	.	.	940	.	.	.	.					.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.											.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	V	C	E	P	I	F	E	K	P	L	A	E	I	S	F	G	H	V	L	L	N	L	F	N	T	A	R	R	F	N	M	E	V	Q	P	Q	L	V	L	L	Q	K	T	L	L	Y	V	E	G	V	G	R	Q	L	Y	P	Q	L	D	L
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.
Template Sequence		F	E	L	L	Y	S	F	S	T	Q	.	.	.	.	.	.	.	.	.	.	M	E	R	V	R	I	I	T	D	V	R	N	L	K	F	P	L	L	F	T	Q	K	Y	P	Q	E	H	M	M	V	Q	D	M	L	S	P	S	P	T	E	R	P
Template Known Secondary structure						S						.	.	.	.	.	.	.	.	.	.												T	T																							S	S	G	G	G	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1013	.	.	.	.	.	.	1020	.	.											.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions