Job Description P0A6A0 Confidence 99.58% Date Thu Jan 5 11:02:40 GMT 2012 Rank 206 Aligned Residues 254 % Identity 13% Template c3mdyC_ PDB info PDB header:transferase/isomerase Chain: C: PDB Molecule:bone morphogenetic protein receptor type-1b; PDBTitle: crystal structure of the cytoplasmic domain of the bone morphogenetic2 protein receptor type-1b (bmpr1b) in complex with fkbp12 and ldn-3 193189 Resolution 2.05 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	A	S	I	A	Q	V	H	T	A	R	L	K	S	N	G	K	E	V	V	I	K	V	I	R	P	D	I	L	P	V	I	K	A	D	L	K	L	I	Y	R	L	A	R	W	V	P	R	L	L	P	D	G	R	R	L	R	P	T	E	V	V	R	E	Y	E	K	T	L	I	D	E	L	N	L	L	R	E
Query Conservation
Alig confidence																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	K	G	R	Y	G	E	V	W	M	G	K	W	R	.	.	G	E	K	V	A	V	K	V	F	F	T	T	E	E	A	S	.	.	.	.	.	.	.	.	.	.	.	.	W	F	R	E	T	E	I	Y	Q	T	V	L	M	R	H	E	N	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T									T	.	.	T										G	G	G				.	.	.	.	.	.	.	.	.	.	.	.									T	S	T	T				T	T	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240													.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		S	A	N	A	I	Q	L	R	R	N	F	E	D	S	P	M	L	Y	I	P	E	V	Y	P	D	Y	C	S	E	G	M	M	V	M	E	R	I	Y	G	I	P	V	S	D	V	A	A	L	E	K	N	G	T	N	M	K	L	L	A	E	R	G	V	Q	V	F	F	T	Q	V	F	R	D	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	I	A	A	D	I	K	G	T	G	S	W	T	Q	L	Y	L	I	T	D	Y	H	E	N	G	S	L	Y	D	Y	L	K	S	T	T	L	D	A	K	S	M	L	K	L	A	Y	S	S	V	S	G	L	C	H	L	H	T	E	I	F	S	T	Q	G	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.									S		G	G	G											T	T		B										B																					S		B		S	T	T		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
			283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.							.	350	.	.	.	.	.
Predicted Secondary structure		.																																																																			.	.	.	.	.	.
Query SS confidence		.																																																																			.	.	.	.	.	.
Query Sequence		.	S	F	F	H	A	D	M	H	P	G	N	I	F	V	S	Y	E	H	P	E	N	P	K	Y	I	G	I	D	C	G	I	V	G	S	L	N	K	E	D	K	R	Y	L	A	E	N	F	I	A	F	F	N	R	D	Y	R	K	V	A	E	L	H	V	D	S	G	.	.	.	.	.	.	W	V	P	P	D	T	N
Query Conservation		.																																																																			.	.	.	.	.	.
Alig confidence		.																.	.	.	.																					.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																		.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Sequence		P	A	I	A	H	R	D	L	K	S	K	N	I	L	V	K	.	.	.	.	K	N	G	T	C	C	I	A	D	L	G	L	A	V	K	F	I	I	P	P	.	.	.	.	.	.	.	.	.	N	T	R	V	G	T	K	R	Y	M	P	P	E	V	L	D	E	S	L	N	R	N	H	F	Q	S	Y	I	M	A	D
Template Known Secondary structure							S				G	G	G					.	.	.	.	T	T	S								T	T									.	.	.	.	.	.	.	.	.		S	S		S		G	G	G							T	S				T	T		T
Template Predicted Secondary structure																		.	.	.	.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.					.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.										.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.														380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	E	F	E	F	A	I	R	T	V	C	E	P	I	F	E	K	P	L	A	E	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	H	V	L	L	N	L	F	N	T	A	R	R	F	N	M	E	V	Q	P	Q	L	V	L	L	Q	K	T	L	L	Y	V	E	G	V	G	R	Q	L	Y	P	Q
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	Y	S	F	G	L	I	L	W	E	V	A	R	R	C	V	S	G	G	I	V	E	E	Y	Q	L	P	Y	H	D	L	V	P	S	D	P	S	Y	E	D	M	R	E	I	V	C	I	K	K	L	R	P	S	F	P	N	R	W	S	S	D	E	C	L	R	Q	M	G	K	L	M	T	E	C	W	A	H	N	P	A
Template Known Secondary structure														T	T	B		B	T	T	B							T	T	T	T	T	S		S	S											T	T	S								G	G	G	G	G															S		S	S	G	G
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
		423	.	.		.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		L	D	L	.	W	K	T	A	K	P	F	L	E	S	W	I	K	D	Q
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		S	R	L	T	A	L	R	V	K	K	T	L	A	K	M	S	E	S	Q
Template Known Secondary structure		G	S																T	T
Template Predicted Secondary structure
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions